Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.219-201ENST00000364232 113 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 Y_RNA.426-201ENST00000384068 113 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DOAP06340 MIR1236-201ENST00000408340 102 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 RNU7-161P-201ENST00000517289 62 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 AC104996.3-201ENST00000590718 94 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
HLA-DOAP06340 RNU6-1275P-201ENST00000391087 107 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 RNU6-1265P-201ENST00000516342 103 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 SNORA25.13-201ENST00000516395 103 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 AC140658.3-201ENST00000567603 271 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 MIR4666B-201ENST00000578142 81 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 MIR3612-201ENST00000579753 87 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 MIR4696-201ENST00000581431 70 ntBASIC0.99□□□□□ -2.25
HLA-DOAP06340 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DOAP06340 Y_RNA.491-201ENST00000384417 107 ntBASIC0.98□□□□□ -2.25
HLA-DOAP06340 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
HLA-DOAP06340 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
HLA-DOAP06340 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
HLA-DOAP06340 AC011195.1-201ENST00000578177 177 ntBASIC0.98□□□□□ -2.25
HLA-DOAP06340 MIR4796-201ENST00000580742 81 ntBASIC0.98□□□□□ -2.25
HLA-DOAP06340 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DOAP06340 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
HLA-DOAP06340 Y_RNA.316-201ENST00000365118 111 ntBASIC0.97□□□□□ -2.25
HLA-DOAP06340 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
HLA-DOAP06340 AL450471.1-201ENST00000447509 127 ntBASIC0.97□□□□□ -2.25
HLA-DOAP06340 RNA5SP403-201ENST00000363598 108 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 SNORD115-37-201ENST00000363768 82 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 SNORD101-201ENST00000384027 73 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 Y_RNA.607-201ENST00000410597 98 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 RNU7-104P-201ENST00000459398 79 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DOAP06340 MIR3140-201ENST00000583685 90 ntBASIC0.96□□□□□ -2.26
HLA-DOAP06340 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 MIR3678-201ENST00000578455 94 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 MIR548AG2-201ENST00000581228 64 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 MTRNR2L2-201ENST00000604882 87 ntBASIC0.95□□□□□ -2.26
HLA-DOAP06340 SNORD18A-201ENST00000363753 72 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 RNU6-478P-201ENST00000363904 110 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 Y_RNA.207-201ENST00000364142 106 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 Y_RNA.596-201ENST00000410462 109 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 RNU6-1052P-201ENST00000411398 104 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 RNU6-719P-201ENST00000516671 104 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 AC244669.1-204ENST00000621564 178 ntBASIC0.94□□□□□ -2.26
HLA-DOAP06340 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
HLA-DOAP06340 Y_RNA.94-201ENST00000363068 106 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 MIR548U-201ENST00000390728 81 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 snoU13.17-201ENST00000458802 104 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 RNU6-287P-201ENST00000516230 98 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.93□□□□□ -2.26
HLA-DOAP06340 MIR3920-201ENST00000581751 86 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
HLA-DOAP06340 MIR3202-2-201ENST00000635980 79 ntBASIC0.93□□□□□ -2.26
HLA-DOAP06340 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.92□□□□□ -2.26
HLA-DOAP06340 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DOAP06340 RNU6-1108P-201ENST00000516308 104 ntBASIC0.92□□□□□ -2.26
HLA-DOAP06340 RNA5SP395-201ENST00000516567 118 ntBASIC0.92□□□□□ -2.26
HLA-DOAP06340 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
HLA-DOAP06340 MIR18A-201ENST00000362310 71 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 RNU6-161P-201ENST00000363051 106 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 Y_RNA.239-201ENST00000364444 113 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 FGF7P7-201ENST00000514120 227 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 RNU7-13P-201ENST00000516413 62 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.91□□□□□ -2.26
HLA-DOAP06340 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HLA-DOAP06340 RNU6-624P-201ENST00000363411 107 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 RNU6-716P-201ENST00000365621 103 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 RNU6-469P-201ENST00000516253 101 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
HLA-DOAP06340 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
HLA-DOAP06340 SNORA63.2-201ENST00000362603 126 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 RNU6-1051P-201ENST00000365471 102 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 MIR451A-201ENST00000385059 72 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 MIR2113-201ENST00000459007 91 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 Y_RNA.685-201ENST00000516532 108 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 RNA5SP47-201ENST00000517230 109 ntBASIC0.89□□□□□ -2.27
HLA-DOAP06340 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.89□□□□□ -2.27
HLA-DOAP06340 SNORA36.1-201ENST00000363424 132 ntBASIC0.88□□□□□ -2.27
HLA-DOAP06340 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HLA-DOAP06340 RNU6-1126P-201ENST00000384002 107 ntBASIC0.88□□□□□ -2.27
HLA-DOAP06340 MIR4712-201ENST00000583750 82 ntBASIC0.88□□□□□ -2.27
HLA-DOAP06340 MIR4639-201ENST00000584938 69 ntBASIC0.88□□□□□ -2.27
HLA-DOAP06340 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
HLA-DOAP06340 RNU6-129P-201ENST00000391022 107 ntBASIC0.87□□□□□ -2.27
HLA-DOAP06340 RNU6-935P-201ENST00000410371 100 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms