Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNY1P11-201ENST00000363759 113 ntBASIC-1.62□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.62□□□□□ -2.67
HLA-DQB2P05538 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.62□□□□□ -2.67
HLA-DQB2P05538 AC107027.2-201ENST00000512197 115 ntBASIC-1.62□□□□□ -2.67
HLA-DQB2P05538 AC138207.3-201ENST00000585289 166 ntBASIC-1.62□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.63□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.63□□□□□ -2.67
HLA-DQB2P05538 RNU6-75P-201ENST00000515944 104 ntBASIC-1.63□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.63□□□□□ -2.67
HLA-DQB2P05538 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 MIR3646-201ENST00000578301 84 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 YWHAEP3-201ENST00000582767 121 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 U6.96-201ENST00000636425 70 ntBASIC-1.64□□□□□ -2.67
HLA-DQB2P05538 RNU4-40P-201ENST00000364351 143 ntBASIC-1.65□□□□□ -2.67
HLA-DQB2P05538 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.65□□□□□ -2.67
HLA-DQB2P05538 MT-TW-201ENST00000387382 68 ntBASIC-1.65□□□□□ -2.67
HLA-DQB2P05538 SNORD127-201ENST00000458892 86 ntBASIC-1.65□□□□□ -2.67
HLA-DQB2P05538 AC021146.9-201ENST00000512503 156 ntBASIC-1.65□□□□□ -2.67
HLA-DQB2P05538 RNU6-990P-201ENST00000364385 104 ntBASIC-1.66□□□□□ -2.68
HLA-DQB2P05538 MIR1302-6-201ENST00000408466 90 ntBASIC-1.66□□□□□ -2.68
HLA-DQB2P05538 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.66□□□□□ -2.68
HLA-DQB2P05538 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.66□□□□□ -2.68
HLA-DQB2P05538 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 MIR759-201ENST00000390224 91 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 RNU6-65P-201ENST00000516332 98 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 MIR4464-201ENST00000580818 92 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 AL353803.5-201ENST00000599815 141 ntBASIC-1.67□□□□□ -2.68
HLA-DQB2P05538 MTND4P29-201ENST00000503122 1372 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 RNU6-363P-201ENST00000362895 105 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 SNORD37.2-201ENST00000391075 66 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 MIR4536-1-201ENST00000583537 88 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 U6.104-201ENST00000637979 90 ntBASIC-1.68□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.69□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.69□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.69□□□□□ -2.68
HLA-DQB2P05538 AC090617.8-201ENST00000623339 167 ntBASIC-1.69□□□□□ -2.68
HLA-DQB2P05538 RNU6-495P-201ENST00000362995 107 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 RNU6-409P-201ENST00000384114 104 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 AC068339.1-201ENST00000526965 141 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 AL442128.1-201ENST00000615151 90 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 MIR6888-201ENST00000621977 67 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 MIR3658-201ENST00000636291 56 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 AC132825.6-201ENST00000638861 357 ntBASIC-1.7□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 MIR548D2-201ENST00000384955 97 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 MTND5P20-201ENST00000448677 143 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 MIR3140-201ENST00000583685 90 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 AL445584.3-201ENST00000617173 78 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 AC025521.1-201ENST00000621624 286 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 MIR4320-201ENST00000636981 65 ntBASIC-1.71□□□□□ -2.68
HLA-DQB2P05538 RNU6-985P-201ENST00000410182 104 ntBASIC-1.72□□□□□ -2.68
HLA-DQB2P05538 AC026421.1-201ENST00000519101 163 ntBASIC-1.72□□□□□ -2.68
HLA-DQB2P05538 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.72□□□□□ -2.68
HLA-DQB2P05538 MIR8062-201ENST00000621515 85 ntBASIC-1.72□□□□□ -2.68
HLA-DQB2P05538 RNU6-238P-201ENST00000363313 106 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 MT-TD-201ENST00000387419 68 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 AC134503.1-201ENST00000633048 54 ntBASIC-1.73□□□□□ -2.69
HLA-DQB2P05538 SNORA63.2-201ENST00000362603 126 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 MIR548P-201ENST00000408336 84 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 MTND2P23-201ENST00000422990 651 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 SNORD57-201ENST00000448188 72 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 RNU6-635P-201ENST00000516651 102 ntBASIC-1.74□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 RNU6-312P-201ENST00000364629 107 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 RNU6-918P-201ENST00000391219 106 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 RNU6-479P-201ENST00000516348 105 ntBASIC-1.75□□□□□ -2.69
HLA-DQB2P05538 RNU6-132P-201ENST00000383863 107 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 RNU6-746P-201ENST00000384112 109 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 MIR1263-201ENST00000408324 86 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 RNA5SP266-201ENST00000410273 108 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 RNU7-134P-201ENST00000458997 64 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 AL160413.1-201ENST00000622780 310 ntBASIC-1.76□□□□□ -2.69
HLA-DQB2P05538 RNU4-32P-201ENST00000363404 141 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 SNORD50.2-201ENST00000365465 70 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 MIR29B1-201ENST00000385015 81 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 RNU2-38P-201ENST00000410856 79 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 RNU7-85P-201ENST00000458851 63 ntBASIC-1.77□□□□□ -2.69
HLA-DQB2P05538 MIR3171-201ENST00000584270 74 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms