Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL442128.1-201ENST00000615151 90 ntBASIC-0.09□□□□□ -2.42
PDGFBP01127 AL035470.1-201ENST00000622571 220 ntBASIC-0.09□□□□□ -2.42
PDGFBP01127 SNORD36A-201ENST00000362874 73 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 RNU1-141P-201ENST00000364623 158 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 MIR539-201ENST00000365690 78 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 MIR548H2-201ENST00000408874 88 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 RNU6-287P-201ENST00000516230 98 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 AC007012.1-201ENST00000567192 175 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 YWHAEP2-201ENST00000580066 112 ntBASIC-0.1□□□□□ -2.43
PDGFBP01127 MIR519E-201ENST00000385075 84 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 MIR2113-201ENST00000459007 91 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 RNU7-74P-201ENST00000459104 62 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 RNU7-159P-201ENST00000459284 62 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 MIR4460-201ENST00000577862 86 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 U6.100-201ENST00000636230 99 ntBASIC-0.11□□□□□ -2.43
PDGFBP01127 MIR181B2-201ENST00000385004 89 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
PDGFBP01127 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 MIR3133-201ENST00000583157 78 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 MIR4743-201ENST00000584576 69 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 RNU6-86P-201ENST00000606534 107 ntBASIC-0.12□□□□□ -2.43
PDGFBP01127 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 RNU6-46P-201ENST00000383860 107 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 MIR617-201ENST00000385030 97 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 MIR892B-201ENST00000401279 77 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 snoU13.11-201ENST00000459219 104 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 SNORD33.1-201ENST00000516213 88 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
PDGFBP01127 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.14□□□□□ -2.43
PDGFBP01127 MIR577-201ENST00000385196 96 ntBASIC-0.14□□□□□ -2.43
PDGFBP01127 MIR548A3-201ENST00000385297 97 ntBASIC-0.14□□□□□ -2.43
PDGFBP01127 RNA5SP266-201ENST00000410273 108 ntBASIC-0.14□□□□□ -2.43
PDGFBP01127 AC109327.2-201ENST00000448339 378 ntBASIC-0.14□□□□□ -2.43
PDGFBP01127 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 SNORD115-44-201ENST00000365391 82 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 RNY1P5-201ENST00000383890 115 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 MT-TR-201ENST00000387439 65 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 RNU6-466P-201ENST00000391224 103 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 SNORA25.13-201ENST00000516395 103 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 AL670379.3-201ENST00000605040 251 ntBASIC-0.15□□□□□ -2.43
PDGFBP01127 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 AC068339.1-201ENST00000526965 141 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 uc_338.10-201ENST00000621872 182 ntBASIC-0.16□□□□□ -2.44
PDGFBP01127 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 SNORD114-28-201ENST00000363610 72 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 RNU6-480P-201ENST00000384332 107 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 SNORA75.1-201ENST00000391130 148 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 MIR8064-201ENST00000612863 90 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 AC025521.1-201ENST00000621624 286 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
PDGFBP01127 RNU6-832P-201ENST00000363319 107 ntBASIC-0.18□□□□□ -2.44
PDGFBP01127 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
PDGFBP01127 RNU6-80P-201ENST00000384195 107 ntBASIC-0.18□□□□□ -2.44
PDGFBP01127 RNU7-188P-201ENST00000517063 64 ntBASIC-0.18□□□□□ -2.44
PDGFBP01127 MIR3613-201ENST00000579844 87 ntBASIC-0.18□□□□□ -2.44
PDGFBP01127 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.18□□□□□ -2.44
PDGFBP01127 U8.6-201ENST00000364939 135 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 SNORD101-201ENST00000384027 73 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 RNU7-165P-201ENST00000458864 60 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 MIR548AE1-201ENST00000583292 70 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 AC069503.3-201ENST00000618674 145 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 MIR3914-2-201ENST00000637339 95 ntBASIC-0.19□□□□□ -2.44
PDGFBP01127 RNA5SP67-201ENST00000516422 131 ntBASIC-0.2□□□□□ -2.44
PDGFBP01127 RN7SL660P-201ENST00000614852 299 ntBASIC-0.2□□□□□ -2.44
PDGFBP01127 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 AC093423.1-201ENST00000440817 142 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 RPS29P8-201ENST00000445109 171 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 RNU6-762P-201ENST00000517107 102 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 MIR4694-201ENST00000578534 80 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 MIR548AX-201ENST00000580117 73 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 MIR4696-201ENST00000581431 70 ntBASIC-0.21□□□□□ -2.44
PDGFBP01127 RNU6-664P-201ENST00000362381 107 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNY3P2-201ENST00000362918 102 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-154P-201ENST00000384306 106 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 MIR548I1-201ENST00000408810 149 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-659P-201ENST00000516454 104 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-719P-201ENST00000516671 104 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-180P-201ENST00000516697 61 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms