Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
PRPF40AO75400 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 RNU6-242P-201ENST00000384359 107 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 AC022137.1-201ENST00000483735 151 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 RNA5SP94-201ENST00000516917 108 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 MTRNR2L2-201ENST00000604882 87 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
PRPF40AO75400 RNU6-716P-201ENST00000365621 103 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 MIR140-201ENST00000385282 100 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 RNU6-935P-201ENST00000410371 100 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 RNA5SP227-201ENST00000516184 113 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 SNORA72.7-201ENST00000516349 94 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 MIR3920-201ENST00000581751 86 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.06□□□□□ -2.24
PRPF40AO75400 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 RNA5SP292-201ENST00000390974 118 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 SNORA18.5-201ENST00000516616 101 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 MIR4796-201ENST00000580742 81 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 MIR5588-201ENST00000581890 63 ntBASIC1.05□□□□□ -2.24
PRPF40AO75400 Y_RNA.207-201ENST00000364142 106 ntBASIC1.04□□□□□ -2.24
PRPF40AO75400 RNY1P8-201ENST00000383970 114 ntBASIC1.04□□□□□ -2.24
PRPF40AO75400 Y_RNA.426-201ENST00000384068 113 ntBASIC1.04□□□□□ -2.24
PRPF40AO75400 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.04□□□□□ -2.24
PRPF40AO75400 AC093729.1-201ENST00000513074 128 ntBASIC1.04□□□□□ -2.24
PRPF40AO75400 RNU6-287P-201ENST00000516230 98 ntBASIC1.04□□□□□ -2.24
PRPF40AO75400 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PRPF40AO75400 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
PRPF40AO75400 RNU6-497P-201ENST00000365316 104 ntBASIC1.03□□□□□ -2.24
PRPF40AO75400 RNU7-74P-201ENST00000459104 62 ntBASIC1.03□□□□□ -2.24
PRPF40AO75400 RNU7-153P-201ENST00000516455 62 ntBASIC1.03□□□□□ -2.24
PRPF40AO75400 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
PRPF40AO75400 RNU6-1126P-201ENST00000384002 107 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 MIR2113-201ENST00000459007 91 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
PRPF40AO75400 RNU6-726P-201ENST00000364680 107 ntBASIC1.01□□□□□ -2.25
PRPF40AO75400 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
PRPF40AO75400 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
PRPF40AO75400 MIR6828-201ENST00000636181 60 ntBASIC1.01□□□□□ -2.25
PRPF40AO75400 AC006160.2-201ENST00000637708 154 ntBASIC1.01□□□□□ -2.25
PRPF40AO75400 SNORD41.1-201ENST00000391000 69 ntBASIC1□□□□□ -2.25
PRPF40AO75400 DLEU2_3.1-201ENST00000620005 73 ntBASIC1□□□□□ -2.25
PRPF40AO75400 AC092634.7-201ENST00000621022 103 ntBASIC1□□□□□ -2.25
PRPF40AO75400 SNORA36.1-201ENST00000363424 132 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 RNU6-979P-201ENST00000383896 107 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 Y_RNA.388-201ENST00000383919 113 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 MIR617-201ENST00000385030 97 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 MIR451A-201ENST00000385059 72 ntBASIC0.99□□□□□ -2.25
PRPF40AO75400 RNY4P3-201ENST00000365254 95 ntBASIC0.98□□□□□ -2.25
PRPF40AO75400 RNU6-1276P-201ENST00000365372 104 ntBASIC0.98□□□□□ -2.25
PRPF40AO75400 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 FGF7P7-201ENST00000514120 227 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 SNORA25.13-201ENST00000516395 103 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 MIR548AG2-201ENST00000581228 64 ntBASIC0.97□□□□□ -2.25
PRPF40AO75400 RNA5SP173-201ENST00000364857 136 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 SNORA8.2-201ENST00000384372 139 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 RNU6-1152P-201ENST00000384576 107 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
PRPF40AO75400 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PRPF40AO75400 RNA5SP517-201ENST00000364724 117 ntBASIC0.95□□□□□ -2.26
PRPF40AO75400 RNU6-42P-201ENST00000384165 107 ntBASIC0.95□□□□□ -2.26
PRPF40AO75400 MIR216B-201ENST00000390186 82 ntBASIC0.95□□□□□ -2.26
PRPF40AO75400 Y_RNA.607-201ENST00000410597 98 ntBASIC0.95□□□□□ -2.26
PRPF40AO75400 RNU5F-1-201ENST00000362507 117 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 RNU6-1051P-201ENST00000365471 102 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 MIR146A-201ENST00000385201 99 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 SNORD71-201ENST00000411292 86 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 RNU7-171P-201ENST00000459581 62 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 MIR7107-201ENST00000611489 80 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
PRPF40AO75400 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
PRPF40AO75400 MIR519E-201ENST00000385075 84 ntBASIC0.93□□□□□ -2.26
PRPF40AO75400 MIR548J-201ENST00000408833 112 ntBASIC0.93□□□□□ -2.26
PRPF40AO75400 AC140658.3-201ENST00000567603 271 ntBASIC0.93□□□□□ -2.26
PRPF40AO75400 U3.27-201ENST00000391237 200 ntBASIC0.92□□□□□ -2.26
PRPF40AO75400 RNU6-592P-201ENST00000411333 103 ntBASIC0.92□□□□□ -2.26
PRPF40AO75400 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
PRPF40AO75400 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
PRPF40AO75400 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
PRPF40AO75400 SNORA63.2-201ENST00000362603 126 ntBASIC0.91□□□□□ -2.26
PRPF40AO75400 RNU6-269P-201ENST00000391077 97 ntBASIC0.91□□□□□ -2.26
PRPF40AO75400 SNORA40.8-201ENST00000411034 126 ntBASIC0.91□□□□□ -2.26
PRPF40AO75400 snoU13.18-201ENST00000459483 104 ntBASIC0.91□□□□□ -2.26
PRPF40AO75400 SNORA25.18-201ENST00000607153 114 ntBASIC0.91□□□□□ -2.26
PRPF40AO75400 RNU6-573P-201ENST00000383938 106 ntBASIC0.9□□□□□ -2.27
PRPF40AO75400 RNU6-1052P-201ENST00000411398 104 ntBASIC0.9□□□□□ -2.27
PRPF40AO75400 RNU6-719P-201ENST00000516671 104 ntBASIC0.9□□□□□ -2.27
PRPF40AO75400 AL162376.1-201ENST00000624117 175 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 400.6 ms