Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORA18.5-201ENST00000516616 101 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 U6.100-201ENST00000636230 99 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 SNORD115-24-201ENST00000363528 82 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 Y_RNA.239-201ENST00000364444 113 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 SNORD101-201ENST00000384027 73 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 RNU6-787P-201ENST00000384032 107 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 Y_RNA.491-201ENST00000384417 107 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 RNA5SP292-201ENST00000390974 118 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 MIR4796-201ENST00000580742 81 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 MIRLET7F1-201ENST00000362202 87 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 RNU6-624P-201ENST00000363411 107 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 SNORD115-44-201ENST00000365391 82 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR644A-201ENST00000385262 94 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 RNU6-469P-201ENST00000516253 101 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR3612-201ENST00000579753 87 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR4639-201ENST00000584938 69 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
VAMP4O75379 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
VAMP4O75379 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.12□□□□□ -2.23
VAMP4O75379 RNU4-45P-201ENST00000365469 141 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
VAMP4O75379 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 Y_RNA.437-201ENST00000384113 113 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 RNU6-1124P-201ENST00000384169 107 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VAMP4O75379 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 SNORD18A-201ENST00000363753 72 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 Y_RNA.207-201ENST00000364142 106 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 RNU6-1275P-201ENST00000391087 107 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
VAMP4O75379 RNU7-13P-201ENST00000516413 62 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 RNU6-228P-201ENST00000362700 106 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 Y_RNA.316-201ENST00000365118 111 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNU6-287P-201ENST00000516230 98 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNA5SP395-201ENST00000516567 118 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
VAMP4O75379 AC011195.1-201ENST00000578177 177 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 MIR3920-201ENST00000581751 86 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AL353765.1-201ENST00000605514 183 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC244669.1-204ENST00000621564 178 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC067863.3-201ENST00000624172 122 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 Y_RNA.313-201ENST00000365095 103 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 RNU6-935P-201ENST00000410371 100 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VAMP4O75379 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-1229P-201ENST00000364295 107 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-652P-201ENST00000365488 107 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 MIR1255A-201ENST00000408338 113 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-557P-201ENST00000516842 110 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 RNY4P3-201ENST00000365254 95 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 SNORD41.1-201ENST00000391000 69 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 U3.27-201ENST00000391237 200 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 SNORA63.2-201ENST00000362603 126 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6-1051P-201ENST00000365471 102 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6-1126P-201ENST00000384002 107 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU7-104P-201ENST00000459398 79 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 FGF7P7-201ENST00000514120 227 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-129P-201ENST00000391022 107 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 Y_RNA.660-201ENST00000516002 120 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 MIR6828-201ENST00000636181 60 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-315P-201ENST00000362666 107 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 MIR617-201ENST00000385030 97 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU6-279P-201ENST00000391297 101 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 MIR2113-201ENST00000459007 91 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU7-74P-201ENST00000459104 62 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU6-1057P-201ENST00000517162 102 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 RNU6-726P-201ENST00000364680 107 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR216B-201ENST00000390186 82 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.01□□□□□ -2.25
VAMP4O75379 MIR548AG2-201ENST00000581228 64 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
VAMP4O75379 Y_RNA.264-201ENST00000364665 102 ntBASIC1□□□□□ -2.25
VAMP4O75379 MIR7-2-201ENST00000384970 110 ntBASIC1□□□□□ -2.25
VAMP4O75379 SNORD90-201ENST00000391145 111 ntBASIC1□□□□□ -2.25
VAMP4O75379 AL450471.1-201ENST00000447509 127 ntBASIC1□□□□□ -2.25
VAMP4O75379 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
VAMP4O75379 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
VAMP4O75379 IST1-227ENST00000626438 126 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms