Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORA18.5-201ENST00000516616 101 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 U6.100-201ENST00000636230 99 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 SNORD115-24-201ENST00000363528 82 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 Y_RNA.239-201ENST00000364444 113 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 SNORD101-201ENST00000384027 73 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 RNU6-787P-201ENST00000384032 107 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 Y_RNA.491-201ENST00000384417 107 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 RNA5SP292-201ENST00000390974 118 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 MIR4796-201ENST00000580742 81 ntBASIC1.14□□□□□ -2.23
VAMP4O75379 MIRLET7F1-201ENST00000362202 87 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 RNU6-624P-201ENST00000363411 107 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 SNORD115-44-201ENST00000365391 82 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR644A-201ENST00000385262 94 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 RNU6-469P-201ENST00000516253 101 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR3612-201ENST00000579753 87 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR4639-201ENST00000584938 69 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
VAMP4O75379 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
VAMP4O75379 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
VAMP4O75379 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.12□□□□□ -2.23
VAMP4O75379 RNU4-45P-201ENST00000365469 141 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
VAMP4O75379 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
VAMP4O75379 Y_RNA.437-201ENST00000384113 113 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 RNU6-1124P-201ENST00000384169 107 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VAMP4O75379 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
VAMP4O75379 SNORD18A-201ENST00000363753 72 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 Y_RNA.207-201ENST00000364142 106 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 RNU6-1275P-201ENST00000391087 107 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
VAMP4O75379 RNU7-13P-201ENST00000516413 62 ntBASIC1.09□□□□□ -2.23
VAMP4O75379 RNU6-228P-201ENST00000362700 106 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 Y_RNA.316-201ENST00000365118 111 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNU6-287P-201ENST00000516230 98 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNA5SP395-201ENST00000516567 118 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
VAMP4O75379 AC011195.1-201ENST00000578177 177 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 MIR3920-201ENST00000581751 86 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AL353765.1-201ENST00000605514 183 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC244669.1-204ENST00000621564 178 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 AC067863.3-201ENST00000624172 122 ntBASIC1.08□□□□□ -2.24
VAMP4O75379 Y_RNA.313-201ENST00000365095 103 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 RNU6-935P-201ENST00000410371 100 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
VAMP4O75379 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VAMP4O75379 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-1229P-201ENST00000364295 107 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-652P-201ENST00000365488 107 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 MIR1255A-201ENST00000408338 113 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-557P-201ENST00000516842 110 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.06□□□□□ -2.24
VAMP4O75379 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 RNY4P3-201ENST00000365254 95 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 SNORD41.1-201ENST00000391000 69 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 U3.27-201ENST00000391237 200 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
VAMP4O75379 SNORA63.2-201ENST00000362603 126 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6-1051P-201ENST00000365471 102 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6-1126P-201ENST00000384002 107 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RNU7-104P-201ENST00000459398 79 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 FGF7P7-201ENST00000514120 227 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.04□□□□□ -2.24
VAMP4O75379 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-129P-201ENST00000391022 107 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 Y_RNA.660-201ENST00000516002 120 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 MIR6828-201ENST00000636181 60 ntBASIC1.03□□□□□ -2.24
VAMP4O75379 RNU6-315P-201ENST00000362666 107 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 MIR617-201ENST00000385030 97 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU6-279P-201ENST00000391297 101 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 MIR2113-201ENST00000459007 91 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU7-74P-201ENST00000459104 62 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 RNU6-1057P-201ENST00000517162 102 ntBASIC1.02□□□□□ -2.25
VAMP4O75379 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 RNU6-726P-201ENST00000364680 107 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR216B-201ENST00000390186 82 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.01□□□□□ -2.25
VAMP4O75379 MIR548AG2-201ENST00000581228 64 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
VAMP4O75379 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
VAMP4O75379 Y_RNA.264-201ENST00000364665 102 ntBASIC1□□□□□ -2.25
VAMP4O75379 MIR7-2-201ENST00000384970 110 ntBASIC1□□□□□ -2.25
VAMP4O75379 SNORD90-201ENST00000391145 111 ntBASIC1□□□□□ -2.25
VAMP4O75379 AL450471.1-201ENST00000447509 127 ntBASIC1□□□□□ -2.25
VAMP4O75379 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
VAMP4O75379 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
VAMP4O75379 IST1-227ENST00000626438 126 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms