Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SNORD4B-201ENST00000459083 72 ntBASIC0.68□□□□□ -2.3
CACNA1FO60840 snoU13.11-201ENST00000459219 104 ntBASIC0.68□□□□□ -2.3
CACNA1FO60840 RNU6-65P-201ENST00000516332 98 ntBASIC0.68□□□□□ -2.3
CACNA1FO60840 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1FO60840 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 Y_RNA.596-201ENST00000410462 109 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 Y_RNA.609-201ENST00000410669 89 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 AC067940.1-201ENST00000458411 300 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 RNU6-1057P-201ENST00000517162 102 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 MIR548Z-201ENST00000584743 97 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 AC062037.1-201ENST00000605302 128 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1FO60840 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 U6.100-201ENST00000636230 99 ntBASIC0.67□□□□□ -2.3
CACNA1FO60840 Y_RNA.73-201ENST00000362910 113 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 Y_RNA.593-201ENST00000410292 98 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 RNY4P29-201ENST00000410801 97 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 Y_RNA.620-201ENST00000411009 88 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 SNORA72.7-201ENST00000516349 94 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 RNU7-161P-201ENST00000517289 62 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 Y_RNA.17-201ENST00000362433 111 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 SNORD73B-201ENST00000364394 72 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 Y_RNA.433-201ENST00000384089 102 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 Y_RNA.648-201ENST00000459455 110 ntBASIC0.66□□□□□ -2.3
CACNA1FO60840 RNU6-466P-201ENST00000391224 103 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 MIR8087-201ENST00000612745 78 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 Y_RNA.68-201ENST00000362881 102 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 RNU6-726P-201ENST00000364680 107 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 RNU6-1152P-201ENST00000384576 107 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 MIR617-201ENST00000385030 97 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 MIR518A1-201ENST00000385068 85 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 AC002429.1-201ENST00000437672 148 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 RNU6-1110P-201ENST00000516462 101 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
CACNA1FO60840 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CACNA1FO60840 MIR548U-201ENST00000390728 81 ntBASIC0.64□□□□□ -2.31
CACNA1FO60840 RNU7-106P-201ENST00000459514 67 ntBASIC0.64□□□□□ -2.31
CACNA1FO60840 AC022137.1-201ENST00000483735 151 ntBASIC0.64□□□□□ -2.31
CACNA1FO60840 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
CACNA1FO60840 AL162376.1-201ENST00000624117 175 ntBASIC0.64□□□□□ -2.31
CACNA1FO60840 RNU4-32P-201ENST00000363404 141 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 RNU6-624P-201ENST00000363411 107 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 RNA5SP245-201ENST00000364239 121 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 Y_RNA.239-201ENST00000364444 113 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 MIR548L-201ENST00000408303 86 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 ACA64.5-201ENST00000516207 127 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 AL136317.1-201ENST00000612653 226 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 MIR2909-201ENST00000617113 69 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 MIR494-201ENST00000349529 81 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 RNU6-132P-201ENST00000383863 107 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 RNA5SP292-201ENST00000390974 118 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 SNORD100-201ENST00000408573 76 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 MIR4639-201ENST00000584938 69 ntBASIC0.63□□□□□ -2.31
CACNA1FO60840 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
CACNA1FO60840 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
CACNA1FO60840 Y_RNA.491-201ENST00000384417 107 ntBASIC0.62□□□□□ -2.31
CACNA1FO60840 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CACNA1FO60840 RNU7-171P-201ENST00000459581 62 ntBASIC0.62□□□□□ -2.31
CACNA1FO60840 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
CACNA1FO60840 RNU6-633P-201ENST00000362612 103 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 Y_RNA.283-201ENST00000364798 112 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 MIR519A1-201ENST00000385257 85 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.61□□□□□ -2.31
CACNA1FO60840 AC140658.3-201ENST00000567603 271 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 MIR4668-201ENST00000582284 70 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 AC067863.3-201ENST00000624172 122 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CACNA1FO60840 MIR599-201ENST00000385069 95 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
CACNA1FO60840 Y_RNA.313-201ENST00000365095 103 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 RNU6-811P-201ENST00000384069 107 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 RNU6-1052P-201ENST00000411398 104 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 AC244505.6-201ENST00000452829 130 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 RNU6-719P-201ENST00000516671 104 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.6□□□□□ -2.31
CACNA1FO60840 RNY4P3-201ENST00000365254 95 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 RNU6-1276P-201ENST00000365372 104 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 SNORD101-201ENST00000384027 73 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 MIR1236-201ENST00000408340 102 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
CACNA1FO60840 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.32
CACNA1FO60840 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.32
CACNA1FO60840 MIR4796-201ENST00000580742 81 ntBASIC0.59□□□□□ -2.32
CACNA1FO60840 RNU6-228P-201ENST00000362700 106 ntBASIC0.58□□□□□ -2.32
CACNA1FO60840 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CACNA1FO60840 Y_RNA.437-201ENST00000384113 113 ntBASIC0.58□□□□□ -2.32
CACNA1FO60840 IGLL4P-201ENST00000614590 133 ntBASIC0.58□□□□□ -2.32
CACNA1FO60840 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 RNU6-219P-201ENST00000364728 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms