Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNORA25.16-201ENST00000516741 121 ntBASIC1.7□□□□□ -2.14
GRIN3BO60391 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
GRIN3BO60391 AC106800.4-201ENST00000614905 153 ntBASIC1.7□□□□□ -2.14
GRIN3BO60391 MIR6767-201ENST00000637302 66 ntBASIC1.7□□□□□ -2.14
GRIN3BO60391 RNU1-36P-201ENST00000365130 165 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 MIR633-201ENST00000384821 98 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 RNU6-243P-201ENST00000391140 107 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 RNU6-466P-201ENST00000391224 103 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 AC079150.2-201ENST00000443733 78 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 SNORD79.1-201ENST00000516069 84 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 RNU6-1194P-201ENST00000516208 104 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 RNU6-531P-201ENST00000516694 104 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 MIR4491-201ENST00000581087 68 ntBASIC1.69□□□□□ -2.14
GRIN3BO60391 SNORA25.4-201ENST00000363666 124 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNU6-824P-201ENST00000363724 104 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNU6-681P-201ENST00000364012 104 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNU6-910P-201ENST00000390844 107 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 SNORD12-201ENST00000391002 90 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 Y_RNA.606-201ENST00000410579 103 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 TRAJ51-201ENST00000504127 63 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNU6-977P-201ENST00000516411 103 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 RNA5SP61-201ENST00000516453 100 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 MIR3660-201ENST00000584845 100 ntBASIC1.68□□□□□ -2.14
GRIN3BO60391 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.67□□□□□ -2.14
GRIN3BO60391 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GRIN3BO60391 RNU6-669P-201ENST00000365575 107 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 Y_RNA.371-201ENST00000365591 113 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
GRIN3BO60391 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 AC110620.1-201ENST00000416042 228 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 RNU7-185P-201ENST00000459215 60 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 RNU7-90P-201ENST00000459216 62 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 MIR4511-201ENST00000582784 87 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 U6.100-201ENST00000636230 99 ntBASIC1.67□□□□□ -2.14
GRIN3BO60391 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GRIN3BO60391 MIR1257-201ENST00000408490 117 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 RNU7-195P-201ENST00000458793 62 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 snoU13.21-201ENST00000459368 105 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 MIR5000-201ENST00000577717 103 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 MTRNR2L2-201ENST00000604882 87 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 U6.81-201ENST00000612550 106 ntBASIC1.66□□□□□ -2.14
GRIN3BO60391 RNU4-58P-201ENST00000363192 141 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 Y_RNA.258-201ENST00000364613 105 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 RNU6-934P-201ENST00000365154 107 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 SNORA40.6-201ENST00000391153 128 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 AC093423.1-201ENST00000440817 142 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 MIR4696-201ENST00000581431 70 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
GRIN3BO60391 TRDV1-202ENST00000621643 102 ntBASIC1.65□□□□□ -2.15
GRIN3BO60391 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
GRIN3BO60391 MIR519A1-201ENST00000385257 85 ntBASIC1.64□□□□□ -2.15
GRIN3BO60391 SNORD100-201ENST00000408573 76 ntBASIC1.64□□□□□ -2.15
GRIN3BO60391 RNU6-881P-201ENST00000516813 102 ntBASIC1.64□□□□□ -2.15
GRIN3BO60391 SNORA70.22-201ENST00000517160 124 ntBASIC1.64□□□□□ -2.15
GRIN3BO60391 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
GRIN3BO60391 RNU6-829P-201ENST00000363700 112 ntBASIC1.63□□□□□ -2.15
GRIN3BO60391 MIR320A-201ENST00000385302 82 ntBASIC1.63□□□□□ -2.15
GRIN3BO60391 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
GRIN3BO60391 MIR3675-201ENST00000583661 73 ntBASIC1.63□□□□□ -2.15
GRIN3BO60391 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
GRIN3BO60391 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
GRIN3BO60391 SNORD113.1-201ENST00000363280 73 ntBASIC1.62□□□□□ -2.15
GRIN3BO60391 RNU6-604P-201ENST00000390917 100 ntBASIC1.62□□□□□ -2.15
GRIN3BO60391 RNU6-765P-201ENST00000516916 99 ntBASIC1.62□□□□□ -2.15
GRIN3BO60391 AC023827.1-201ENST00000569247 97 ntBASIC1.62□□□□□ -2.15
GRIN3BO60391 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.62□□□□□ -2.15
GRIN3BO60391 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.62□□□□□ -2.15
GRIN3BO60391 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
GRIN3BO60391 RNU6-664P-201ENST00000362381 107 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 SNORD45.1-201ENST00000363181 77 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 Y_RNA.536-201ENST00000384621 113 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 MIR193B-201ENST00000384907 83 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 MIR125B2-201ENST00000385128 89 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 RPS26P5-201ENST00000418544 335 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.61□□□□□ -2.15
GRIN3BO60391 RNU6-1260P-201ENST00000362944 107 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 RNU6-403P-201ENST00000363163 104 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 Y_RNA.236-201ENST00000364427 111 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 MIR1273G-201ENST00000577677 100 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 MIR4771-2-201ENST00000577758 74 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 MIR4771-1-201ENST00000582617 74 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 MIR6082-201ENST00000613604 109 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 AC103706.3-201ENST00000636297 85 ntBASIC1.6□□□□□ -2.15
GRIN3BO60391 RNU6-1187P-201ENST00000364771 110 ntBASIC1.59□□□□□ -2.15
GRIN3BO60391 AC097510.1-201ENST00000510945 133 ntBASIC1.59□□□□□ -2.15
GRIN3BO60391 RNU6-1265P-201ENST00000516342 103 ntBASIC1.59□□□□□ -2.15
GRIN3BO60391 RNU7-40P-201ENST00000516397 64 ntBASIC1.59□□□□□ -2.15
GRIN3BO60391 AC013244.2-201ENST00000603396 103 ntBASIC1.59□□□□□ -2.15
GRIN3BO60391 RNU6-1216P-201ENST00000362590 107 ntBASIC1.58□□□□□ -2.16
GRIN3BO60391 SNORD101-201ENST00000384027 73 ntBASIC1.58□□□□□ -2.16
GRIN3BO60391 RNU6-895P-201ENST00000384125 103 ntBASIC1.58□□□□□ -2.16
GRIN3BO60391 RNU6-982P-201ENST00000516216 102 ntBASIC1.58□□□□□ -2.16
GRIN3BO60391 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GRIN3BO60391 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GRIN3BO60391 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms