Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU6-509P-201ENST00000363519 107 ntBASIC0.9□□□□□ -2.27
PROM1O43490 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
PROM1O43490 Y_RNA.388-201ENST00000383919 113 ntBASIC0.9□□□□□ -2.27
PROM1O43490 RNU6-811P-201ENST00000384069 107 ntBASIC0.9□□□□□ -2.27
PROM1O43490 MIR519C-201ENST00000385053 87 ntBASIC0.9□□□□□ -2.27
PROM1O43490 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
PROM1O43490 Y_RNA.30-201ENST00000362572 97 ntBASIC0.89□□□□□ -2.27
PROM1O43490 RNU6-1229P-201ENST00000364295 107 ntBASIC0.89□□□□□ -2.27
PROM1O43490 RNU6-497P-201ENST00000365316 104 ntBASIC0.89□□□□□ -2.27
PROM1O43490 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
PROM1O43490 RNU6-75P-201ENST00000515944 104 ntBASIC0.89□□□□□ -2.27
PROM1O43490 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
PROM1O43490 MIR1273G-201ENST00000577677 100 ntBASIC0.89□□□□□ -2.27
PROM1O43490 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
PROM1O43490 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
PROM1O43490 MIR548BB-201ENST00000626714 66 ntBASIC0.89□□□□□ -2.27
PROM1O43490 MIRLET7F1-201ENST00000362202 87 ntBASIC0.88□□□□□ -2.27
PROM1O43490 SNORD115-37-201ENST00000363768 82 ntBASIC0.88□□□□□ -2.27
PROM1O43490 Y_RNA.433-201ENST00000384089 102 ntBASIC0.88□□□□□ -2.27
PROM1O43490 RNU6-242P-201ENST00000384359 107 ntBASIC0.88□□□□□ -2.27
PROM1O43490 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
PROM1O43490 MIR548U-201ENST00000390728 81 ntBASIC0.88□□□□□ -2.27
PROM1O43490 MIR1236-201ENST00000408340 102 ntBASIC0.88□□□□□ -2.27
PROM1O43490 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
PROM1O43490 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
PROM1O43490 MIR3678-201ENST00000578455 94 ntBASIC0.88□□□□□ -2.27
PROM1O43490 U6.100-201ENST00000636230 99 ntBASIC0.88□□□□□ -2.27
PROM1O43490 RNA5SP173-201ENST00000364857 136 ntBASIC0.87□□□□□ -2.27
PROM1O43490 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
PROM1O43490 AC244098.3-201ENST00000424803 96 ntBASIC0.87□□□□□ -2.27
PROM1O43490 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
PROM1O43490 Y_RNA.681-201ENST00000516445 113 ntBASIC0.87□□□□□ -2.27
PROM1O43490 RNU6-135P-201ENST00000516769 101 ntBASIC0.87□□□□□ -2.27
PROM1O43490 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
PROM1O43490 RNU6-132P-201ENST00000383863 107 ntBASIC0.86□□□□□ -2.27
PROM1O43490 SNORD101-201ENST00000384027 73 ntBASIC0.86□□□□□ -2.27
PROM1O43490 Y_RNA.596-201ENST00000410462 109 ntBASIC0.86□□□□□ -2.27
PROM1O43490 RNU7-13P-201ENST00000516413 62 ntBASIC0.86□□□□□ -2.27
PROM1O43490 RNU7-153P-201ENST00000516455 62 ntBASIC0.86□□□□□ -2.27
PROM1O43490 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
PROM1O43490 MIR5588-201ENST00000581890 63 ntBASIC0.86□□□□□ -2.27
PROM1O43490 AC104996.3-201ENST00000590718 94 ntBASIC0.86□□□□□ -2.27
PROM1O43490 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
PROM1O43490 Y_RNA.239-201ENST00000364444 113 ntBASIC0.85□□□□□ -2.27
PROM1O43490 RNA5SP292-201ENST00000390974 118 ntBASIC0.85□□□□□ -2.27
PROM1O43490 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PROM1O43490 MIR548L-201ENST00000408303 86 ntBASIC0.85□□□□□ -2.27
PROM1O43490 RNU6-592P-201ENST00000411333 103 ntBASIC0.85□□□□□ -2.27
PROM1O43490 RNU6-1265P-201ENST00000516342 103 ntBASIC0.85□□□□□ -2.27
PROM1O43490 RNU7-161P-201ENST00000517289 62 ntBASIC0.85□□□□□ -2.27
PROM1O43490 MIR3064-201ENST00000581130 66 ntBASIC0.85□□□□□ -2.27
PROM1O43490 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
PROM1O43490 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
PROM1O43490 RNU6-664P-201ENST00000362381 107 ntBASIC0.84□□□□□ -2.27
PROM1O43490 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
PROM1O43490 RNU6-573P-201ENST00000383938 106 ntBASIC0.84□□□□□ -2.27
PROM1O43490 Y_RNA.426-201ENST00000384068 113 ntBASIC0.84□□□□□ -2.27
PROM1O43490 Y_RNA.491-201ENST00000384417 107 ntBASIC0.84□□□□□ -2.27
PROM1O43490 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.84□□□□□ -2.27
PROM1O43490 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
PROM1O43490 MIR4639-201ENST00000584938 69 ntBASIC0.84□□□□□ -2.27
PROM1O43490 MIR924-201ENST00000638017 53 ntBASIC0.84□□□□□ -2.27
PROM1O43490 RNA5SP403-201ENST00000363598 108 ntBASIC0.83□□□□□ -2.28
PROM1O43490 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
PROM1O43490 SNORD28-201ENST00000384706 75 ntBASIC0.83□□□□□ -2.28
PROM1O43490 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
PROM1O43490 AC093729.1-201ENST00000513074 128 ntBASIC0.83□□□□□ -2.28
PROM1O43490 MIR4696-201ENST00000581431 70 ntBASIC0.83□□□□□ -2.28
PROM1O43490 AC067863.3-201ENST00000624172 122 ntBASIC0.83□□□□□ -2.28
PROM1O43490 RNU6-1276P-201ENST00000365372 104 ntBASIC0.82□□□□□ -2.28
PROM1O43490 RNA5SP395-201ENST00000516567 118 ntBASIC0.82□□□□□ -2.28
PROM1O43490 SNORA18.5-201ENST00000516616 101 ntBASIC0.82□□□□□ -2.28
PROM1O43490 RNU6-1057P-201ENST00000517162 102 ntBASIC0.82□□□□□ -2.28
PROM1O43490 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.82□□□□□ -2.28
PROM1O43490 MIR4796-201ENST00000580742 81 ntBASIC0.82□□□□□ -2.28
PROM1O43490 AC006160.2-201ENST00000637708 154 ntBASIC0.82□□□□□ -2.28
PROM1O43490 RNU6-979P-201ENST00000383896 107 ntBASIC0.81□□□□□ -2.28
PROM1O43490 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
PROM1O43490 Y_RNA.115-201ENST00000363272 98 ntBASIC0.8□□□□□ -2.28
PROM1O43490 SNORD115-44-201ENST00000365391 82 ntBASIC0.8□□□□□ -2.28
PROM1O43490 RNU4-45P-201ENST00000365469 141 ntBASIC0.8□□□□□ -2.28
PROM1O43490 RNU6-716P-201ENST00000365621 103 ntBASIC0.8□□□□□ -2.28
PROM1O43490 RNU6-1152P-201ENST00000384576 107 ntBASIC0.8□□□□□ -2.28
PROM1O43490 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
PROM1O43490 RNU6-287P-201ENST00000516230 98 ntBASIC0.8□□□□□ -2.28
PROM1O43490 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
PROM1O43490 Y_RNA.207-201ENST00000364142 106 ntBASIC0.79□□□□□ -2.28
PROM1O43490 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
PROM1O43490 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
PROM1O43490 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
PROM1O43490 SNORA25.13-201ENST00000516395 103 ntBASIC0.79□□□□□ -2.28
PROM1O43490 RNA5SP47-201ENST00000517230 109 ntBASIC0.79□□□□□ -2.28
PROM1O43490 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.79□□□□□ -2.28
PROM1O43490 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PROM1O43490 RNA5SP62-201ENST00000363457 110 ntBASIC0.78□□□□□ -2.28
PROM1O43490 RNY1P8-201ENST00000383970 114 ntBASIC0.78□□□□□ -2.28
PROM1O43490 Y_RNA.437-201ENST00000384113 113 ntBASIC0.78□□□□□ -2.28
PROM1O43490 RNU6-935P-201ENST00000410371 100 ntBASIC0.78□□□□□ -2.28
PROM1O43490 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
PROM1O43490 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms