Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 MT-TL1-201ENST00000386347 75 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 MT-TI-201ENST00000387365 69 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 AC113618.1-201ENST00000416747 285 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 MIR4520-1-201ENST00000582609 70 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 U2.14-201ENST00000615943 113 ntBASIC-1.93□□□□□ -2.72
TRAV27A0A087WT01 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.94□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.94□□□□□ -2.72
TRAV27A0A087WT01 MIR1246-201ENST00000636535 73 ntBASIC-1.94□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.95□□□□□ -2.72
TRAV27A0A087WT01 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.95□□□□□ -2.72
TRAV27A0A087WT01 MIR3163-201ENST00000581592 73 ntBASIC-1.95□□□□□ -2.72
TRAV27A0A087WT01 AC091912.2-201ENST00000624798 167 ntBASIC-1.95□□□□□ -2.72
TRAV27A0A087WT01 AC021753.1-201ENST00000635724 168 ntBASIC-1.95□□□□□ -2.72
TRAV27A0A087WT01 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 SNORD115-22-201ENST00000364456 82 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 RNU6-309P-201ENST00000364573 106 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 RNY3P16-201ENST00000516338 101 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 MIR4770-201ENST00000579149 58 ntBASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.96□□□□□ -2.72
TRAV27A0A087WT01 RNA5SP26-201ENST00000362406 119 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 MIR507-201ENST00000385234 94 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 MIR1255B2-201ENST00000408618 67 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 RNU6-65P-201ENST00000516332 98 ntBASIC-1.97□□□□□ -2.72
TRAV27A0A087WT01 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 SNORD18B-201ENST00000365659 72 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 MIR3140-201ENST00000583685 90 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 AL132765.2-201ENST00000610812 351 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 MIR6129-201ENST00000616087 109 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 MIR6874-201ENST00000635894 71 ntBASIC-1.98□□□□□ -2.73
TRAV27A0A087WT01 SNORA63.2-201ENST00000362603 126 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 RNU6-493P-201ENST00000391321 108 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 AL353691.2-201ENST00000443795 59 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 MIR4536-1-201ENST00000583537 88 ntBASIC-1.99□□□□□ -2.73
TRAV27A0A087WT01 RNU6-275P-201ENST00000364910 107 ntBASIC-2□□□□□ -2.73
TRAV27A0A087WT01 MIR548A1-201ENST00000385041 97 ntBASIC-2□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.690-201ENST00000516603 95 ntBASIC-2□□□□□ -2.73
TRAV27A0A087WT01 U4.2-201ENST00000618561 85 ntBASIC-2□□□□□ -2.73
TRAV27A0A087WT01 AC090971.5-201ENST00000621102 293 ntBASIC-2□□□□□ -2.73
TRAV27A0A087WT01 RNU6-164P-201ENST00000364604 103 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 SNORA33.1-201ENST00000364957 130 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 SNORA75.5-201ENST00000391291 81 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 SNORD75.2-201ENST00000408784 58 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 MIR6502-201ENST00000617296 76 ntBASIC-2.01□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 MIR759-201ENST00000390224 91 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 Z83846.1-201ENST00000446798 265 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 RNU7-24P-201ENST00000458867 62 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 MIR3149-201ENST00000584629 83 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.02□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 RNU6-226P-201ENST00000363778 107 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 AL078595.1-201ENST00000404458 226 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 FGF7P6-202ENST00000451282 293 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 RNA5SP147-201ENST00000516493 109 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 AC025521.1-201ENST00000621624 286 ntBASIC-2.03□□□□□ -2.73
TRAV27A0A087WT01 RNU6-363P-201ENST00000362895 105 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 SNORD114-3-201ENST00000364969 75 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 RNU6-132P-201ENST00000383863 107 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 SNORA24B-201ENST00000384176 131 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 snoU13.17-201ENST00000458802 104 ntBASIC-2.04□□□□□ -2.74
TRAV27A0A087WT01 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 AL589823.1-201ENST00000429577 183 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 AC107027.2-201ENST00000512197 115 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 RNU6-412P-201ENST00000516434 106 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 CYP3A54P-201ENST00000566950 75 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 AL442128.1-201ENST00000615151 90 ntBASIC-2.05□□□□□ -2.74
TRAV27A0A087WT01 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms