Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA2A-201ENST00000383885 135 ntBASIC0.32□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.563-201ENST00000384707 108 ntBASIC0.32□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-243P-201ENST00000391140 107 ntBASIC0.32□□□□□ -2.36
COL4A3BPQ9Y5P4 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.247-201ENST00000364500 92 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.353-201ENST00000365440 108 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-412P-201ENST00000516434 106 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.3□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-880P-201ENST00000384526 107 ntBASIC0.3□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.549-201ENST00000384657 102 ntBASIC0.3□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
COL4A3BPQ9Y5P4 RNY3P2-201ENST00000362918 102 ntBASIC0.29□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR760-201ENST00000390220 80 ntBASIC0.29□□□□□ -2.36
COL4A3BPQ9Y5P4 U7.6-201ENST00000610841 64 ntBASIC0.29□□□□□ -2.36
COL4A3BPQ9Y5P4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.29□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-509P-201ENST00000363519 107 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 SNORD115-44-201ENST00000365391 82 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-480P-201ENST00000384332 107 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR577-201ENST00000385196 96 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR5009-201ENST00000578736 100 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR5706-201ENST00000579841 80 ntBASIC0.28□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-832P-201ENST00000363319 107 ntBASIC0.27□□□□□ -2.37
COL4A3BPQ9Y5P4 U8.6-201ENST00000364939 135 ntBASIC0.27□□□□□ -2.37
COL4A3BPQ9Y5P4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.281-201ENST00000364774 94 ntBASIC0.26□□□□□ -2.37
COL4A3BPQ9Y5P4 SNORD116-21-201ENST00000384507 92 ntBASIC0.26□□□□□ -2.37
COL4A3BPQ9Y5P4 RNU6-62P-201ENST00000516526 102 ntBASIC0.26□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR4752-201ENST00000579672 72 ntBASIC0.26□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR924-201ENST00000638017 53 ntBASIC0.26□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR330-201ENST00000362196 94 ntBASIC0.25□□□□□ -2.37
COL4A3BPQ9Y5P4 RNA5SP128-201ENST00000365305 116 ntBASIC0.25□□□□□ -2.37
COL4A3BPQ9Y5P4 AL603908.1-201ENST00000406098 201 ntBASIC0.25□□□□□ -2.37
COL4A3BPQ9Y5P4 RNU7-129P-201ENST00000516128 62 ntBASIC0.25□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR3920-201ENST00000581751 86 ntBASIC0.25□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 SNORD36A-201ENST00000362874 73 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 RNU6-1117P-201ENST00000384525 104 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 RNU6-269P-201ENST00000391077 97 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 AC141557.1-201ENST00000540982 400 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR4514-201ENST00000581410 57 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 AC132825.6-201ENST00000638861 357 ntBASIC0.24□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.163-201ENST00000363702 113 ntBASIC0.23□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.23□□□□□ -2.37
COL4A3BPQ9Y5P4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 SNORD45B-201ENST00000364617 72 ntBASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR4439-201ENST00000583746 80 ntBASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
COL4A3BPQ9Y5P4 Y_RNA.261-201ENST00000364631 102 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-466P-201ENST00000391224 103 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 RNA5SP330-201ENST00000517096 96 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 TRDV1-202ENST00000621643 102 ntBASIC0.21□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU4-36P-201ENST00000364294 144 ntBASIC0.2□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.2□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU1-29P-201ENST00000606574 126 ntBASIC0.2□□□□□ -2.38
COL4A3BPQ9Y5P4 AL365222.1-201ENST00000614661 98 ntBASIC0.2□□□□□ -2.38
COL4A3BPQ9Y5P4 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
COL4A3BPQ9Y5P4 AC006210.1-201ENST00000424882 111 ntBASIC0.19□□□□□ -2.38
COL4A3BPQ9Y5P4 MIR3910-1-201ENST00000580936 111 ntBASIC0.19□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1144P-201ENST00000384247 104 ntBASIC0.18□□□□□ -2.38
COL4A3BPQ9Y5P4 SNORA70.25-201ENST00000612741 95 ntBASIC0.18□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-22P-201ENST00000384355 107 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-476P-201ENST00000384726 107 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 MIR617-201ENST00000385030 97 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1064P-201ENST00000410626 104 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-834P-201ENST00000362367 110 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 SNORD110-201ENST00000408189 75 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 MIR1197-201ENST00000408818 88 ntBASIC0.16□□□□□ -2.38
COL4A3BPQ9Y5P4 MIR181B2-201ENST00000385004 89 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 RNU6-1168P-201ENST00000390831 104 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 AC109327.2-201ENST00000448339 378 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 RNU6-479P-201ENST00000516348 105 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 uc_338.28-201ENST00000612082 187 ntBASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.15□□□□□ -2.39
COL4A3BPQ9Y5P4 RNA5SP325-201ENST00000363756 130 ntBASIC0.14□□□□□ -2.39
COL4A3BPQ9Y5P4 RNA5SP205-201ENST00000364653 136 ntBASIC0.14□□□□□ -2.39
COL4A3BPQ9Y5P4 RNU6-652P-201ENST00000365488 107 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms