Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MTND3P22-201ENST00000510932 243 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 RNU6-307P-201ENST00000516743 106 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 AC119751.7-201ENST00000600494 245 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.773-201ENST00000607168 90 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 PISRT1.1-201ENST00000616930 107 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 MIR1321-201ENST00000637766 79 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 MTND5P26-201ENST00000426018 1752 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 MIR520D-201ENST00000385002 87 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 MIR122-201ENST00000385044 85 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 MIR616-201ENST00000385293 97 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 RNU6-630P-201ENST00000391258 106 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 RNU6-1148P-201ENST00000410992 104 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 MIR23C-201ENST00000579846 100 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 MIR3657-201ENST00000584818 117 ntBASIC-3.14□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 RNU6-382P-201ENST00000365181 106 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 RNU6-132P-201ENST00000383863 107 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 RNU6-662P-201ENST00000384253 104 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 MIR521-2-201ENST00000384818 87 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.682-201ENST00000516457 100 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 MIR466-201ENST00000580653 84 ntBASIC-3.15□□□□□ -2.91
AP4S1Q9Y587 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 RNU6-908P-201ENST00000410160 94 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 RNU4-43P-201ENST00000410628 137 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 RNU7-125P-201ENST00000458760 62 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 MIR3915-201ENST00000578518 97 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 AL606534.2-204ENST00000635008 178 ntBASIC-3.16□□□□□ -2.92
AP4S1Q9Y587 RNU6-1085P-201ENST00000363576 107 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.217-201ENST00000364214 105 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 RNU6-1013P-201ENST00000384180 107 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 SNORA26.8-201ENST00000391306 124 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 AL021921.1-201ENST00000442774 93 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.641-201ENST00000459414 105 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 RNU6-65P-201ENST00000516332 98 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 MIR4536-1-201ENST00000583537 88 ntBASIC-3.17□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.64-201ENST00000362845 102 ntBASIC-3.18□□□□□ -2.92
AP4S1Q9Y587 RNU6-451P-201ENST00000362921 107 ntBASIC-3.18□□□□□ -2.92
AP4S1Q9Y587 MIR4748-201ENST00000578076 82 ntBASIC-3.18□□□□□ -2.92
AP4S1Q9Y587 MIR6509-201ENST00000614603 85 ntBASIC-3.18□□□□□ -2.92
AP4S1Q9Y587 SNORD38.1-201ENST00000363863 68 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.639-201ENST00000458981 102 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 RNU6-1314P-201ENST00000517139 104 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 RNU6-232P-201ENST00000517144 64 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 AL365265.1-201ENST00000621045 234 ntBASIC-3.19□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.2□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.569-201ENST00000384749 103 ntBASIC-3.2□□□□□ -2.92
AP4S1Q9Y587 RNU6-1109P-201ENST00000391187 107 ntBASIC-3.2□□□□□ -2.92
AP4S1Q9Y587 HSPE1P25-201ENST00000455484 251 ntBASIC-3.2□□□□□ -2.92
AP4S1Q9Y587 RNU6-1129P-201ENST00000515964 104 ntBASIC-3.2□□□□□ -2.92
AP4S1Q9Y587 SNORD115-31-201ENST00000365318 82 ntBASIC-3.21□□□□□ -2.92
AP4S1Q9Y587 SNORD54-201ENST00000459159 67 ntBASIC-3.21□□□□□ -2.92
AP4S1Q9Y587 RNU6-976P-201ENST00000516086 111 ntBASIC-3.21□□□□□ -2.92
AP4S1Q9Y587 AC006254.2-201ENST00000603259 279 ntBASIC-3.21□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 MIR548W-201ENST00000581970 74 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 AC107308.1-201ENST00000615897 301 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 MIR1255B1-201ENST00000636325 63 ntBASIC-3.22□□□□□ -2.92
AP4S1Q9Y587 RNU6-1313P-201ENST00000362622 102 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.314-201ENST00000365114 102 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 RNU2-38P-201ENST00000410856 79 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 RNU7-85P-201ENST00000458851 63 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 RNU6-264P-201ENST00000517134 104 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 VN1R91P-201ENST00000594377 169 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 AL162413.1-201ENST00000603198 110 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 DLEU2_2.2-201ENST00000615474 90 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 Z69908.1-201ENST00000622603 247 ntBASIC-3.23□□□□□ -2.93
AP4S1Q9Y587 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 RNU6-766P-201ENST00000362478 107 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 MIR548F5-201ENST00000408421 86 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 NBR2-204ENST00000587322 63 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.804-201ENST00000615262 101 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 AL512310.12-203ENST00000640543 90 ntBASIC-3.24□□□□□ -2.93
AP4S1Q9Y587 SNORD113-8-201ENST00000363497 74 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 RNU6-211P-201ENST00000384047 107 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.482-201ENST00000384377 111 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 SNORA7.5-201ENST00000410672 110 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 snoU13.10-201ENST00000459301 103 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 RNU6-311P-201ENST00000516224 102 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 RNU7-6P-201ENST00000516845 62 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 U6.106-201ENST00000636360 105 ntBASIC-3.25□□□□□ -2.93
AP4S1Q9Y587 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.26□□□□□ -2.93
AP4S1Q9Y587 RNY3P3-201ENST00000363816 102 ntBASIC-3.26□□□□□ -2.93
AP4S1Q9Y587 RNU6-483P-201ENST00000384088 108 ntBASIC-3.26□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms