Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.437-201ENST00000384113 113 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU7-195P-201ENST00000458793 62 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU6-65P-201ENST00000516332 98 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 MIR598-201ENST00000384868 97 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.313-201ENST00000365095 103 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU6-811P-201ENST00000384069 107 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU7-102P-201ENST00000458948 62 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU4-32P-201ENST00000363404 141 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.316-201ENST00000365118 111 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 RNU6-291P-201ENST00000384720 107 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR19B1-201ENST00000384829 87 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 AC067940.1-201ENST00000458411 300 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 SNORA25.13-201ENST00000516395 103 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-624P-201ENST00000363411 107 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-957P-201ENST00000363652 99 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-535P-201ENST00000384722 107 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR548U-201ENST00000390728 81 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU1-119P-201ENST00000391122 165 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 AC244505.6-201ENST00000452829 130 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU7-153P-201ENST00000516455 62 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP225-201ENST00000410874 135 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 MIR3064-201ENST00000581130 66 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC104996.3-201ENST00000590718 94 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC008608.1-201ENST00000603910 127 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 RNU6-652P-201ENST00000365488 107 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MIR599-201ENST00000385069 95 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MIR4796-201ENST00000580742 81 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MTRNR2L2-201ENST00000604882 87 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 TRDV1-202ENST00000621643 102 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-132P-201ENST00000383863 107 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-857P-201ENST00000515893 110 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-1265P-201ENST00000516342 103 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNU6-24P-201ENST00000384440 107 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 MIR520F-201ENST00000384824 87 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP292-201ENST00000390974 118 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 SNORA18.5-201ENST00000516616 101 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNU6-557P-201ENST00000516842 110 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNU6-315P-201ENST00000362666 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.94-201ENST00000363068 106 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP363-201ENST00000365072 115 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.491-201ENST00000384417 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNU6-997P-201ENST00000384725 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 MIR4712-201ENST00000583750 82 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 RNU6-129P-201ENST00000391022 107 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 AL606490.4-201ENST00000423117 127 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 FGF7P7-201ENST00000514120 227 ntBASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 RNU6-664P-201ENST00000362381 107 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 SNORA63.2-201ENST00000362603 126 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.596-201ENST00000410462 109 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.660-201ENST00000516002 120 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIRLET7F1-201ENST00000362202 87 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms