Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.437-201ENST00000384113 113 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU7-195P-201ENST00000458793 62 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 RNU6-65P-201ENST00000516332 98 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.37□□□□□ -2.19
SIT1Q9Y3P8 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 MIR598-201ENST00000384868 97 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.313-201ENST00000365095 103 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU6-811P-201ENST00000384069 107 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU7-102P-201ENST00000458948 62 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
SIT1Q9Y3P8 RNU4-32P-201ENST00000363404 141 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.316-201ENST00000365118 111 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 RNU6-291P-201ENST00000384720 107 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR19B1-201ENST00000384829 87 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 AC067940.1-201ENST00000458411 300 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 SNORA25.13-201ENST00000516395 103 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.34□□□□□ -2.19
SIT1Q9Y3P8 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-624P-201ENST00000363411 107 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-957P-201ENST00000363652 99 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6-535P-201ENST00000384722 107 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR548U-201ENST00000390728 81 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU1-119P-201ENST00000391122 165 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 AC244505.6-201ENST00000452829 130 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 RNU7-153P-201ENST00000516455 62 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
SIT1Q9Y3P8 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP225-201ENST00000410874 135 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 MIR3064-201ENST00000581130 66 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC104996.3-201ENST00000590718 94 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 AC008608.1-201ENST00000603910 127 ntBASIC1.32□□□□□ -2.2
SIT1Q9Y3P8 RNU6-652P-201ENST00000365488 107 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MIR599-201ENST00000385069 95 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MIR4796-201ENST00000580742 81 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 MTRNR2L2-201ENST00000604882 87 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 TRDV1-202ENST00000621643 102 ntBASIC1.31□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-132P-201ENST00000383863 107 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-857P-201ENST00000515893 110 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNU6-1265P-201ENST00000516342 103 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNU6-24P-201ENST00000384440 107 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 MIR520F-201ENST00000384824 87 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP292-201ENST00000390974 118 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 SNORA18.5-201ENST00000516616 101 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 RNU6-557P-201ENST00000516842 110 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
SIT1Q9Y3P8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNU6-315P-201ENST00000362666 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.94-201ENST00000363068 106 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNA5SP363-201ENST00000365072 115 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 Y_RNA.491-201ENST00000384417 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 RNU6-997P-201ENST00000384725 107 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 MIR4712-201ENST00000583750 82 ntBASIC1.28□□□□□ -2.2
SIT1Q9Y3P8 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 RNU6-129P-201ENST00000391022 107 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 AL606490.4-201ENST00000423117 127 ntBASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 FGF7P7-201ENST00000514120 227 ntBASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.26□□□□□ -2.21
SIT1Q9Y3P8 RNU6-664P-201ENST00000362381 107 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 SNORA63.2-201ENST00000362603 126 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.596-201ENST00000410462 109 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.660-201ENST00000516002 120 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
SIT1Q9Y3P8 MIRLET7F1-201ENST00000362202 87 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms