Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-1254P-201ENST00000391266 104 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 SNORA31.14-201ENST00000516728 116 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-135P-201ENST00000516769 101 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 MIR3612-201ENST00000579753 87 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.178-201ENST00000363832 102 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 MIR181B2-201ENST00000385004 89 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 RNA5SP89-201ENST00000410300 108 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 AL606490.4-201ENST00000423117 127 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 AC097635.1-201ENST00000450678 155 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-469P-201ENST00000516253 101 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 MIR548Z-201ENST00000584743 97 ntBASIC0.86□□□□□ -2.27
SSX2IPQ9Y2D8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 RNA5SP457-201ENST00000363657 124 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.348-201ENST00000365403 103 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 MIR516A2-201ENST00000384888 90 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 MIR516A1-201ENST00000385033 90 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-243P-201ENST00000391140 107 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-644P-201ENST00000391155 98 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-887P-201ENST00000410660 100 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SSX2IPQ9Y2D8 RNA5SP245-201ENST00000364239 121 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 AC244505.6-201ENST00000452829 130 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 RNU7-106P-201ENST00000459514 67 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 RNU7-61P-201ENST00000515897 61 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 AC103810.7-201ENST00000607821 91 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-1260P-201ENST00000362944 107 ntBASIC0.83□□□□□ -2.28
SSX2IPQ9Y2D8 RNU7-195P-201ENST00000458793 62 ntBASIC0.83□□□□□ -2.28
SSX2IPQ9Y2D8 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
SSX2IPQ9Y2D8 MIR18A-201ENST00000362310 71 ntBASIC0.82□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD36A-201ENST00000362874 73 ntBASIC0.82□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD58A-201ENST00000383875 65 ntBASIC0.82□□□□□ -2.28
SSX2IPQ9Y2D8 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
SSX2IPQ9Y2D8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD116-10-201ENST00000363791 102 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 RNU6-905P-201ENST00000384434 107 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 MIR644A-201ENST00000385262 94 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 RNA5SP222-201ENST00000411039 105 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 AC025521.1-201ENST00000621624 286 ntBASIC0.81□□□□□ -2.28
SSX2IPQ9Y2D8 AL513043.2-201ENST00000573941 143 ntBASIC0.8□□□□□ -2.28
SSX2IPQ9Y2D8 MIR3678-201ENST00000578455 94 ntBASIC0.8□□□□□ -2.28
SSX2IPQ9Y2D8 MIR4639-201ENST00000584938 69 ntBASIC0.8□□□□□ -2.28
SSX2IPQ9Y2D8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD114-23-201ENST00000363536 72 ntBASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 RNU6-640P-201ENST00000363693 105 ntBASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 U7.3-201ENST00000616123 62 ntBASIC0.79□□□□□ -2.28
SSX2IPQ9Y2D8 Y_RNA.68-201ENST00000362881 102 ntBASIC0.78□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD115-24-201ENST00000363528 82 ntBASIC0.78□□□□□ -2.28
SSX2IPQ9Y2D8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
SSX2IPQ9Y2D8 MIR924-201ENST00000638017 53 ntBASIC0.78□□□□□ -2.28
SSX2IPQ9Y2D8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.78□□□□□ -2.28
SSX2IPQ9Y2D8 SNORD18A-201ENST00000363753 72 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6-524P-201ENST00000384270 107 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 SNORD28-201ENST00000384706 75 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 AC010487.4-201ENST00000637027 61 ntBASIC0.77□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.220-201ENST00000364244 109 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6-466P-201ENST00000391224 103 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6-162P-201ENST00000516228 103 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 MALAT1.1-201ENST00000618249 95 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.75□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.290-201ENST00000364879 114 ntBASIC0.75□□□□□ -2.29
SSX2IPQ9Y2D8 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
SSX2IPQ9Y2D8 AC244669.1-204ENST00000621564 178 ntBASIC0.74□□□□□ -2.29
SSX2IPQ9Y2D8 RNA5SP403-201ENST00000363598 108 ntBASIC0.73□□□□□ -2.29
SSX2IPQ9Y2D8 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
SSX2IPQ9Y2D8 RNY4P30-201ENST00000410216 95 ntBASIC0.73□□□□□ -2.29
SSX2IPQ9Y2D8 RNA5SP47-201ENST00000517230 109 ntBASIC0.73□□□□□ -2.29
SSX2IPQ9Y2D8 AL109933.3-201ENST00000619095 188 ntBASIC0.73□□□□□ -2.29
SSX2IPQ9Y2D8 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6-519P-201ENST00000410590 108 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 snoU13.11-201ENST00000459219 104 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 231.4 ms