Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-1094P-201ENST00000362416 104 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 RNU1-42P-201ENST00000364033 160 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 Y_RNA.239-201ENST00000364444 113 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 SNORA67.6-201ENST00000391093 99 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 AC002429.1-201ENST00000437672 148 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.81□□□□□ -2.12
NOD1Q9Y239 RNU6-686P-201ENST00000364839 107 ntBASIC1.8□□□□□ -2.12
NOD1Q9Y239 MIR499A-201ENST00000384903 122 ntBASIC1.8□□□□□ -2.12
NOD1Q9Y239 MIR889-201ENST00000401280 79 ntBASIC1.8□□□□□ -2.12
NOD1Q9Y239 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
NOD1Q9Y239 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
NOD1Q9Y239 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NOD1Q9Y239 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
NOD1Q9Y239 MIRLET7A1-201ENST00000362295 80 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 RNU6-664P-201ENST00000362381 107 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 SNORD101-201ENST00000384027 73 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 MIR1827-201ENST00000408549 66 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 Y_RNA.660-201ENST00000516002 120 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 MIR4696-201ENST00000581431 70 ntBASIC1.79□□□□□ -2.12
NOD1Q9Y239 RNA5SP327-201ENST00000362494 101 ntBASIC1.78□□□□□ -2.12
NOD1Q9Y239 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
NOD1Q9Y239 SNORD90-201ENST00000391145 111 ntBASIC1.78□□□□□ -2.12
NOD1Q9Y239 RNU6-380P-201ENST00000410207 107 ntBASIC1.78□□□□□ -2.12
NOD1Q9Y239 Y_RNA.327-201ENST00000365201 102 ntBASIC1.77□□□□□ -2.13
NOD1Q9Y239 SNORD77.2-201ENST00000391045 68 ntBASIC1.77□□□□□ -2.13
NOD1Q9Y239 Y_RNA.596-201ENST00000410462 109 ntBASIC1.77□□□□□ -2.13
NOD1Q9Y239 AC244505.6-201ENST00000452829 130 ntBASIC1.77□□□□□ -2.13
NOD1Q9Y239 AC145423.2-201ENST00000610631 239 ntBASIC1.77□□□□□ -2.13
NOD1Q9Y239 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NOD1Q9Y239 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
NOD1Q9Y239 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.76□□□□□ -2.13
NOD1Q9Y239 RMST_2.1-201ENST00000617263 136 ntBASIC1.76□□□□□ -2.13
NOD1Q9Y239 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NOD1Q9Y239 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
NOD1Q9Y239 RNU6-1265P-201ENST00000516342 103 ntBASIC1.75□□□□□ -2.13
NOD1Q9Y239 SNORA31.14-201ENST00000516728 116 ntBASIC1.75□□□□□ -2.13
NOD1Q9Y239 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
NOD1Q9Y239 U7.4-201ENST00000614961 63 ntBASIC1.75□□□□□ -2.13
NOD1Q9Y239 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NOD1Q9Y239 RNU6-208P-201ENST00000362431 107 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 Y_RNA.32-201ENST00000362589 110 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 Y_RNA.118-201ENST00000363300 101 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 RNU6-1051P-201ENST00000365471 102 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 SNORA31.24-201ENST00000517232 57 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 MTRNR2L2-201ENST00000604882 87 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 MIR7111-201ENST00000619751 72 ntBASIC1.74□□□□□ -2.13
NOD1Q9Y239 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
NOD1Q9Y239 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NOD1Q9Y239 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
NOD1Q9Y239 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
NOD1Q9Y239 Y_RNA.264-201ENST00000364665 102 ntBASIC1.73□□□□□ -2.13
NOD1Q9Y239 MIR520H-201ENST00000385126 88 ntBASIC1.73□□□□□ -2.13
NOD1Q9Y239 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NOD1Q9Y239 uc_338.16-201ENST00000621804 95 ntBASIC1.73□□□□□ -2.13
NOD1Q9Y239 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NOD1Q9Y239 Y_RNA.174-201ENST00000363781 105 ntBASIC1.72□□□□□ -2.13
NOD1Q9Y239 RNU6-1229P-201ENST00000364295 107 ntBASIC1.72□□□□□ -2.13
NOD1Q9Y239 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.72□□□□□ -2.13
NOD1Q9Y239 RNY4P3-201ENST00000365254 95 ntBASIC1.71□□□□□ -2.14
NOD1Q9Y239 SNORD89-201ENST00000390981 114 ntBASIC1.71□□□□□ -2.14
NOD1Q9Y239 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.71□□□□□ -2.14
NOD1Q9Y239 RNU5F-1-201ENST00000362507 117 ntBASIC1.7□□□□□ -2.14
NOD1Q9Y239 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
NOD1Q9Y239 RNU6-935P-201ENST00000410371 100 ntBASIC1.7□□□□□ -2.14
NOD1Q9Y239 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
NOD1Q9Y239 AL136317.1-201ENST00000612653 226 ntBASIC1.7□□□□□ -2.14
NOD1Q9Y239 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NOD1Q9Y239 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NOD1Q9Y239 Y_RNA.207-201ENST00000364142 106 ntBASIC1.69□□□□□ -2.14
NOD1Q9Y239 snoU13.17-201ENST00000458802 104 ntBASIC1.69□□□□□ -2.14
NOD1Q9Y239 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.69□□□□□ -2.14
NOD1Q9Y239 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
NOD1Q9Y239 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
NOD1Q9Y239 RNU6-392P-201ENST00000364926 101 ntBASIC1.68□□□□□ -2.14
NOD1Q9Y239 MIR3140-201ENST00000583685 90 ntBASIC1.68□□□□□ -2.14
NOD1Q9Y239 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.68□□□□□ -2.14
NOD1Q9Y239 SNORD115-24-201ENST00000363528 82 ntBASIC1.67□□□□□ -2.14
NOD1Q9Y239 FABP5P4-201ENST00000437203 171 ntBASIC1.67□□□□□ -2.14
NOD1Q9Y239 SCARNA18B-201ENST00000458806 135 ntBASIC1.67□□□□□ -2.14
NOD1Q9Y239 RNU6-1110P-201ENST00000516462 101 ntBASIC1.67□□□□□ -2.14
NOD1Q9Y239 Y_RNA.788-201ENST00000622394 112 ntBASIC1.67□□□□□ -2.14
NOD1Q9Y239 Y_RNA.355-201ENST00000365462 98 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 MIR451A-201ENST00000385059 72 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 RNU6-287P-201ENST00000516230 98 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 RNU6-807P-201ENST00000516805 107 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
NOD1Q9Y239 Y_RNA.12-201ENST00000362393 112 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 RNA5SP117-201ENST00000365294 118 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 Y_RNA.532-201ENST00000384590 113 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 Y_RNA.565-201ENST00000384719 101 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 AC002350.1-201ENST00000490759 375 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 RNU7-13P-201ENST00000516413 62 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 RNU6-1057P-201ENST00000517162 102 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 MIR4484-201ENST00000582855 83 ntBASIC1.65□□□□□ -2.15
NOD1Q9Y239 SNORD115-44-201ENST00000365391 82 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms