Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MIR494-201ENST00000349529 81 ntBASIC1.47□□□□□ -2.17
SPG7Q9UQ90 RNU6-519P-201ENST00000410590 108 ntBASIC1.47□□□□□ -2.17
SPG7Q9UQ90 U7.7-201ENST00000459276 60 ntBASIC1.47□□□□□ -2.17
SPG7Q9UQ90 MIR1302-4-201ENST00000408701 150 ntBASIC1.46□□□□□ -2.18
SPG7Q9UQ90 snoU13.11-201ENST00000459219 104 ntBASIC1.46□□□□□ -2.18
SPG7Q9UQ90 AC062037.1-201ENST00000605302 128 ntBASIC1.46□□□□□ -2.18
SPG7Q9UQ90 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
SPG7Q9UQ90 RNU1-124P-201ENST00000363861 145 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 RNA5SP245-201ENST00000364239 121 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 SNORD105-201ENST00000386910 85 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 SNORA26.2-201ENST00000390922 122 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 Y_RNA.648-201ENST00000459455 110 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 Y_RNA.809-201ENST00000516058 95 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 SNORA72.7-201ENST00000516349 94 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 RNU6-267P-201ENST00000516714 103 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 AC138907.6-201ENST00000568401 126 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 AC138869.1-201ENST00000568623 124 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 IGLL4P-201ENST00000614590 133 ntBASIC1.45□□□□□ -2.18
SPG7Q9UQ90 RNY1P1-201ENST00000364372 112 ntBASIC1.44□□□□□ -2.18
SPG7Q9UQ90 RNU6-219P-201ENST00000364728 107 ntBASIC1.44□□□□□ -2.18
SPG7Q9UQ90 RNU6-939P-201ENST00000384634 107 ntBASIC1.44□□□□□ -2.18
SPG7Q9UQ90 RNY4P29-201ENST00000410801 97 ntBASIC1.44□□□□□ -2.18
SPG7Q9UQ90 AC098934.3-201ENST00000430450 190 ntBASIC1.44□□□□□ -2.18
SPG7Q9UQ90 SNORD114-24-201ENST00000365029 72 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 MIR519A1-201ENST00000385257 85 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 Y_RNA.620-201ENST00000411009 88 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 AL161932.1-201ENST00000437408 146 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 AC097635.1-201ENST00000450678 155 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 MIR6788-201ENST00000618842 66 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 AL627230.5-201ENST00000619807 58 ntBASIC1.43□□□□□ -2.18
SPG7Q9UQ90 Y_RNA.32-201ENST00000362589 110 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 RNU6-1335P-201ENST00000365426 107 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 RNU6-466P-201ENST00000391224 103 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 RN7SKP12-201ENST00000516275 143 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.42□□□□□ -2.18
SPG7Q9UQ90 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.42□□□□□ -2.18
SPG7Q9UQ90 RNA5SP62-201ENST00000363457 110 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 RNU6-675P-201ENST00000384236 104 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 MIR548J-201ENST00000408833 112 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 RNU7-85P-201ENST00000458851 63 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 SNORA31.14-201ENST00000516728 116 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 RNU6-1223P-201ENST00000517124 104 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
SPG7Q9UQ90 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.41□□□□□ -2.18
SPG7Q9UQ90 Y_RNA.73-201ENST00000362910 113 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 RNU6-1260P-201ENST00000362944 107 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 Y_RNA.388-201ENST00000383919 113 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 SNORD4B-201ENST00000459083 72 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
SPG7Q9UQ90 uc_338.16-201ENST00000621804 95 ntBASIC1.4□□□□□ -2.19
SPG7Q9UQ90 RNU6-957P-201ENST00000363652 99 ntBASIC1.39□□□□□ -2.19
SPG7Q9UQ90 Y_RNA.283-201ENST00000364798 112 ntBASIC1.39□□□□□ -2.19
SPG7Q9UQ90 RNU6-820P-201ENST00000384273 107 ntBASIC1.39□□□□□ -2.19
SPG7Q9UQ90 RNU6-65P-201ENST00000516332 98 ntBASIC1.39□□□□□ -2.19
SPG7Q9UQ90 Y_RNA.174-201ENST00000363781 105 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 RNU6-524P-201ENST00000384270 107 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 AC002350.1-201ENST00000490759 375 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 RNA5SP255-201ENST00000516370 107 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 RN7SL793P-201ENST00000583259 296 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 MIR4536-1-201ENST00000583537 88 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
SPG7Q9UQ90 RNU6-633P-201ENST00000362612 103 ntBASIC1.37□□□□□ -2.19
SPG7Q9UQ90 RNU4-32P-201ENST00000363404 141 ntBASIC1.37□□□□□ -2.19
SPG7Q9UQ90 SNORD115-27-201ENST00000364430 82 ntBASIC1.37□□□□□ -2.19
SPG7Q9UQ90 RNA5SP117-201ENST00000365294 118 ntBASIC1.37□□□□□ -2.19
SPG7Q9UQ90 AC025627.3-201ENST00000582078 182 ntBASIC1.37□□□□□ -2.19
SPG7Q9UQ90 AC244505.6-201ENST00000452829 130 ntBASIC1.36□□□□□ -2.19
SPG7Q9UQ90 AC022137.1-201ENST00000483735 151 ntBASIC1.36□□□□□ -2.19
SPG7Q9UQ90 TRDV1-202ENST00000621643 102 ntBASIC1.36□□□□□ -2.19
SPG7Q9UQ90 RNU6-509P-201ENST00000363519 107 ntBASIC1.35□□□□□ -2.19
SPG7Q9UQ90 Y_RNA.221-201ENST00000364248 96 ntBASIC1.35□□□□□ -2.19
SPG7Q9UQ90 AL606490.4-201ENST00000423117 127 ntBASIC1.35□□□□□ -2.19
SPG7Q9UQ90 MIR6086-201ENST00000638065 55 ntBASIC1.35□□□□□ -2.19
SPG7Q9UQ90 MIR373-201ENST00000362273 69 ntBASIC1.34□□□□□ -2.19
SPG7Q9UQ90 RNA5SP457-201ENST00000363657 124 ntBASIC1.34□□□□□ -2.19
SPG7Q9UQ90 MIR573-201ENST00000384964 99 ntBASIC1.34□□□□□ -2.19
SPG7Q9UQ90 Y_RNA.611-201ENST00000410682 108 ntBASIC1.34□□□□□ -2.19
SPG7Q9UQ90 RNU6-75P-201ENST00000515944 104 ntBASIC1.34□□□□□ -2.19
SPG7Q9UQ90 RNU6-497P-201ENST00000365316 104 ntBASIC1.33□□□□□ -2.2
SPG7Q9UQ90 RNU6-35P-201ENST00000384530 107 ntBASIC1.33□□□□□ -2.2
SPG7Q9UQ90 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
SPG7Q9UQ90 MIR548BB-201ENST00000626714 66 ntBASIC1.33□□□□□ -2.2
SPG7Q9UQ90 RNU4-38P-201ENST00000364472 129 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 RNA5SP173-201ENST00000364857 136 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 MIR519C-201ENST00000385053 87 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 MIR216A-201ENST00000385063 110 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 MIR644A-201ENST00000385262 94 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
SPG7Q9UQ90 SNORD115-24-201ENST00000363528 82 ntBASIC1.31□□□□□ -2.2
SPG7Q9UQ90 SNORD99-201ENST00000408612 74 ntBASIC1.31□□□□□ -2.2
SPG7Q9UQ90 RNU6-592P-201ENST00000411333 103 ntBASIC1.31□□□□□ -2.2
SPG7Q9UQ90 RNU6-469P-201ENST00000516253 101 ntBASIC1.31□□□□□ -2.2
SPG7Q9UQ90 MIR5588-201ENST00000581890 63 ntBASIC1.31□□□□□ -2.2
SPG7Q9UQ90 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 319 ms