Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.41□□□□□ -2.34
DDX4Q9NQI0 MIR7107-201ENST00000611489 80 ntBASIC0.41□□□□□ -2.34
DDX4Q9NQI0 MIR2909-201ENST00000617113 69 ntBASIC0.41□□□□□ -2.34
DDX4Q9NQI0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.41□□□□□ -2.34
DDX4Q9NQI0 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 RNA5SP403-201ENST00000363598 108 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.323-201ENST00000365157 109 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 MIR548L-201ENST00000408303 86 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 MIR1197-201ENST00000408818 88 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 RNU6-1064P-201ENST00000410626 104 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 RNU4-61P-201ENST00000411243 107 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.4□□□□□ -2.35
DDX4Q9NQI0 RNU7-195P-201ENST00000458793 62 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU6-832P-201ENST00000363319 107 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU2-51P-201ENST00000410708 197 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU7-104P-201ENST00000459398 79 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 AC067863.3-201ENST00000624172 122 ntBASIC0.39□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.247-201ENST00000364500 92 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 RNU6-1056P-201ENST00000383996 107 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 MIR4514-201ENST00000581410 57 ntBASIC0.38□□□□□ -2.35
DDX4Q9NQI0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.38□□□□□ -2.35
DDX4Q9NQI0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-726P-201ENST00000364680 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-1107P-201ENST00000364817 104 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-480P-201ENST00000384332 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 MIR516A2-201ENST00000384888 90 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 MIR516A1-201ENST00000385033 90 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-243P-201ENST00000391140 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-848P-201ENST00000515948 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-617P-201ENST00000516147 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-473P-201ENST00000516164 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 RNU6-406P-201ENST00000516470 107 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 AC141557.1-201ENST00000540982 400 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 MIR4439-201ENST00000583746 80 ntBASIC0.37□□□□□ -2.35
DDX4Q9NQI0 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
DDX4Q9NQI0 RNU4-36P-201ENST00000364294 144 ntBASIC0.36□□□□□ -2.35
DDX4Q9NQI0 SNORD45B-201ENST00000364617 72 ntBASIC0.36□□□□□ -2.35
DDX4Q9NQI0 RNU6-716P-201ENST00000365621 103 ntBASIC0.36□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.68-201ENST00000362881 102 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 RNU6-1014P-201ENST00000383940 103 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 RNU6-1081P-201ENST00000384537 107 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 SNORD41.1-201ENST00000391000 69 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 RNU7-106P-201ENST00000459514 67 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
DDX4Q9NQI0 Y_RNA.273-201ENST00000364703 102 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 RNU6-524P-201ENST00000384270 107 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 RNU7-74P-201ENST00000459104 62 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 RNU6-1265P-201ENST00000516342 103 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 RNU7-13P-201ENST00000516413 62 ntBASIC0.34□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.163-201ENST00000363702 113 ntBASIC0.33□□□□□ -2.36
DDX4Q9NQI0 SNORD115-44-201ENST00000365391 82 ntBASIC0.33□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.433-201ENST00000384089 102 ntBASIC0.33□□□□□ -2.36
DDX4Q9NQI0 AL606753.1-201ENST00000427435 87 ntBASIC0.33□□□□□ -2.36
DDX4Q9NQI0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.33□□□□□ -2.36
DDX4Q9NQI0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
DDX4Q9NQI0 SNORD36A-201ENST00000362874 73 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.32□□□□□ -2.36
DDX4Q9NQI0 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 AL162376.1-201ENST00000624117 175 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 AC073869.9-201ENST00000641610 120 ntBASIC0.32□□□□□ -2.36
DDX4Q9NQI0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 MIR1302-5-201ENST00000408164 150 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 AC069271.1-201ENST00000445577 156 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 MIR6129-201ENST00000616087 109 ntBASIC0.31□□□□□ -2.36
DDX4Q9NQI0 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
DDX4Q9NQI0 RNU6-509P-201ENST00000363519 107 ntBASIC0.3□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.178-201ENST00000363832 102 ntBASIC0.3□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 RNU6-466P-201ENST00000391224 103 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.629-201ENST00000411368 105 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 RNU6-589P-201ENST00000516485 107 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.29□□□□□ -2.36
DDX4Q9NQI0 Y_RNA.96-201ENST00000363092 109 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 SNORA2A-201ENST00000383885 135 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 RNU6-1113P-201ENST00000384348 107 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 AC109327.2-201ENST00000448339 378 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 MIR5706-201ENST00000579841 80 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 MIR3920-201ENST00000581751 86 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms