Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 SNORD45B-201ENST00000364617 72 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 RNU6-106P-201ENST00000384405 107 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 RNU6-1254P-201ENST00000391266 104 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 AC109327.2-201ENST00000448339 378 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 RNU7-104P-201ENST00000459398 79 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 RNA5SP227-201ENST00000516184 113 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
SIX2Q9NPC8 SNORD36A-201ENST00000362874 73 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 RNU6-524P-201ENST00000384270 107 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 MIR1302-5-201ENST00000408164 150 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 RNU6-554P-201ENST00000410466 106 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 SNORA19.1-201ENST00000410656 129 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
SIX2Q9NPC8 RNU6-904P-201ENST00000516206 101 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 MIR4439-201ENST00000583746 80 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
SIX2Q9NPC8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.4□□□□□ -2.35
SIX2Q9NPC8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-726P-201ENST00000364680 107 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-480P-201ENST00000384332 107 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNY4P18-201ENST00000391107 89 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-243P-201ENST00000391140 107 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-86P-201ENST00000606534 107 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 uc_338.28-201ENST00000612082 187 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 AC067863.3-201ENST00000624172 122 ntBASIC0.39□□□□□ -2.35
SIX2Q9NPC8 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
SIX2Q9NPC8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.38□□□□□ -2.35
SIX2Q9NPC8 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
SIX2Q9NPC8 RNA5SP436-201ENST00000516020 115 ntBASIC0.38□□□□□ -2.35
SIX2Q9NPC8 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 RNU6-215P-201ENST00000365169 102 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 MIR181B2-201ENST00000385004 89 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 SNORD41.1-201ENST00000391000 69 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 SCARNA23-201ENST00000516060 130 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 RNU6-537P-201ENST00000517277 103 ntBASIC0.37□□□□□ -2.35
SIX2Q9NPC8 Y_RNA.467-201ENST00000384297 102 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 SNORD20-201ENST00000384550 80 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 RNU6-795P-201ENST00000516323 103 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 MIR4711-201ENST00000578274 70 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 MIR4777-201ENST00000583710 86 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 AC012531.4-201ENST00000616509 177 ntBASIC0.36□□□□□ -2.35
SIX2Q9NPC8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
SIX2Q9NPC8 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 SNORA51.5-201ENST00000384126 131 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 RNU6-1113P-201ENST00000384348 107 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 RNU6-813P-201ENST00000384691 107 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 MIR590-201ENST00000385008 97 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 RNU2-59P-201ENST00000410482 191 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.35□□□□□ -2.35
SIX2Q9NPC8 RNU7-13P-201ENST00000516413 62 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 MIR548Z-201ENST00000584743 97 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 AC025521.1-201ENST00000621624 286 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 AL162376.1-201ENST00000624117 175 ntBASIC0.35□□□□□ -2.35
SIX2Q9NPC8 RNU6-756P-201ENST00000383997 107 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 MIR216A-201ENST00000385063 110 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 RNU6-919P-201ENST00000516731 104 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 MIR3920-201ENST00000581751 86 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 TRDV1-202ENST00000621643 102 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
SIX2Q9NPC8 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RNU6-766P-201ENST00000362478 107 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RNU6-957P-201ENST00000363652 99 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RNU6-755P-201ENST00000364400 103 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 AL161932.1-201ENST00000437408 146 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RNA5SP480-201ENST00000516840 109 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 RN7SL793P-201ENST00000583259 296 ntBASIC0.33□□□□□ -2.36
SIX2Q9NPC8 SNORD114-26-201ENST00000363543 72 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.466-201ENST00000384294 113 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 RNU6-466P-201ENST00000391224 103 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 AL031737.1-201ENST00000450125 223 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 snoU13.11-201ENST00000459219 104 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 AL513043.2-201ENST00000573941 143 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 AC103810.7-201ENST00000607821 91 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.818-201ENST00000618813 71 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.32□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 SNORD115-44-201ENST00000365391 82 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 RNU6-269P-201ENST00000391077 97 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
SIX2Q9NPC8 U6.100-201ENST00000636230 99 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms