Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 AC109327.2-201ENST00000448339 378 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 MIR4460-201ENST00000577862 86 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 MIR4645-201ENST00000583158 77 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 TRDV1-202ENST00000621643 102 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 uc_338.10-201ENST00000621872 182 ntBASIC-0.38□□□□□ -2.47
HMG20AQ9NP66 MIR655-201ENST00000362159 97 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 SNORD115-44-201ENST00000365391 82 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 SNORD116-18-201ENST00000383961 92 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 SNORD38.2-201ENST00000384470 69 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 RNU6-781P-201ENST00000516377 101 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 AL512310.12-203ENST00000640543 90 ntBASIC-0.39□□□□□ -2.47
HMG20AQ9NP66 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 RNU6-957P-201ENST00000363652 99 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 RNA5SP205-201ENST00000364653 136 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 RNU6-243P-201ENST00000391140 107 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 RNU6-175P-201ENST00000516896 107 ntBASIC-0.4□□□□□ -2.47
HMG20AQ9NP66 RNA5SP98-201ENST00000363158 137 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 RNU6-811P-201ENST00000384069 107 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 RNU6-804P-201ENST00000384286 107 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 MIR548D2-201ENST00000384955 97 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 RNA5SP272-201ENST00000516095 111 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 AP001328.1-201ENST00000528550 176 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 MIR3666-201ENST00000607845 111 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 AC004792.1-201ENST00000614523 137 ntBASIC-0.41□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNU6-154P-201ENST00000384306 106 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 MIR513C-201ENST00000401352 84 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 MIR548G-201ENST00000408442 89 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNU6-394P-201ENST00000410735 107 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNU6-90P-201ENST00000606352 106 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 AL162726.3-218ENST00000636401 95 ntBASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
HMG20AQ9NP66 RNU6-363P-201ENST00000362895 105 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 RNU6-647P-201ENST00000364243 107 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 MIR539-201ENST00000365690 78 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 MT-TY-201ENST00000387409 66 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 MIR759-201ENST00000390224 91 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 AL158147.1-201ENST00000443970 75 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 MIR5589-201ENST00000579442 60 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 SNORD38.1-201ENST00000363863 68 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 RNA5SP136-201ENST00000410906 107 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 MIR548X2-201ENST00000579776 100 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 AP001340.1-201ENST00000624405 217 ntBASIC-0.44□□□□□ -2.48
HMG20AQ9NP66 RNU6-235P-201ENST00000362644 107 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 AP001180.6-201ENST00000584918 159 ntBASIC-0.45□□□□□ -2.48
HMG20AQ9NP66 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 SNORD114-29-201ENST00000364819 70 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 MIR569-201ENST00000385228 96 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 snoU13.11-201ENST00000459219 104 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 AL590491.3-201ENST00000610731 82 ntBASIC-0.46□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 RNU6-409P-201ENST00000384114 104 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 MIR652-201ENST00000385278 98 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 MIR1912-201ENST00000410389 80 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 MTND5P41-201ENST00000517498 206 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 MIR3144-201ENST00000579460 79 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 MIR4802-201ENST00000581881 80 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 AL353621.2-201ENST00000605340 133 ntBASIC-0.47□□□□□ -2.48
HMG20AQ9NP66 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms