Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 RNU1-119P-201ENST00000391122 165 ntBASIC1.35□□□□□ -2.19
PCDH18Q9HCL0 AC108667.1-201ENST00000428618 249 ntBASIC1.35□□□□□ -2.19
PCDH18Q9HCL0 RNU7-56P-201ENST00000458744 62 ntBASIC1.35□□□□□ -2.19
PCDH18Q9HCL0 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
PCDH18Q9HCL0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
PCDH18Q9HCL0 SNORD89-201ENST00000390981 114 ntBASIC1.34□□□□□ -2.19
PCDH18Q9HCL0 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
PCDH18Q9HCL0 RNU6-765P-201ENST00000516916 99 ntBASIC1.34□□□□□ -2.19
PCDH18Q9HCL0 RNU7-10P-201ENST00000607194 63 ntBASIC1.34□□□□□ -2.19
PCDH18Q9HCL0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 SNORA63.2-201ENST00000362603 126 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR518E-201ENST00000385252 88 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR548U-201ENST00000390728 81 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 RNU6-719P-201ENST00000516671 104 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR4498-201ENST00000577599 66 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDH18Q9HCL0 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 MIR520H-201ENST00000385126 88 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 SNORA31.14-201ENST00000516728 116 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 AC138907.6-201ENST00000568401 126 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 AC138869.1-201ENST00000568623 124 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 MIR4484-201ENST00000582855 83 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 MIR3140-201ENST00000583685 90 ntBASIC1.32□□□□□ -2.2
PCDH18Q9HCL0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 RNU6-776P-201ENST00000364403 104 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 RNU6-1022P-201ENST00000365049 104 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 FGF7P7-201ENST00000514120 227 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 Y_RNA.788-201ENST00000622394 112 ntBASIC1.31□□□□□ -2.2
PCDH18Q9HCL0 RNU6-624P-201ENST00000363411 107 ntBASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 AC097635.1-201ENST00000450678 155 ntBASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 snoU13.17-201ENST00000458802 104 ntBASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 MIR4696-201ENST00000581431 70 ntBASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
PCDH18Q9HCL0 RNU6-664P-201ENST00000362381 107 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 Y_RNA.239-201ENST00000364444 113 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 SNORD101-201ENST00000384027 73 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 SNORD124-201ENST00000459577 104 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 RMST_2.1-201ENST00000617263 136 ntBASIC1.29□□□□□ -2.2
PCDH18Q9HCL0 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 MIR519A1-201ENST00000385257 85 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 MIR644A-201ENST00000385262 94 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 MIR1827-201ENST00000408549 66 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 MIR4662A-201ENST00000637499 67 ntBASIC1.28□□□□□ -2.2
PCDH18Q9HCL0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.27□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1051P-201ENST00000365471 102 ntBASIC1.27□□□□□ -2.21
PCDH18Q9HCL0 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
PCDH18Q9HCL0 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
PCDH18Q9HCL0 SNORD115-24-201ENST00000363528 82 ntBASIC1.26□□□□□ -2.21
PCDH18Q9HCL0 SCARNA18B-201ENST00000458806 135 ntBASIC1.26□□□□□ -2.21
PCDH18Q9HCL0 uc_338.16-201ENST00000621804 95 ntBASIC1.26□□□□□ -2.21
PCDH18Q9HCL0 MIRLET7A1-201ENST00000362295 80 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 RNU6-208P-201ENST00000362431 107 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1229P-201ENST00000364295 107 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 RNU6-686P-201ENST00000364839 107 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 Y_RNA.565-201ENST00000384719 101 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 Y_RNA.596-201ENST00000410462 109 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.25□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1094P-201ENST00000362416 104 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 RNU6-315P-201ENST00000362666 107 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 SNORD77.2-201ENST00000391045 68 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 RNU7-104P-201ENST00000459398 79 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1296P-201ENST00000383879 107 ntBASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 MIR451A-201ENST00000385059 72 ntBASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 RNU6-287P-201ENST00000516230 98 ntBASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 MIR664A-201ENST00000626086 82 ntBASIC1.23□□□□□ -2.21
PCDH18Q9HCL0 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
PCDH18Q9HCL0 AC244505.6-201ENST00000452829 130 ntBASIC1.22□□□□□ -2.21
PCDH18Q9HCL0 RNU6-1265P-201ENST00000516342 103 ntBASIC1.22□□□□□ -2.21
PCDH18Q9HCL0 AC145423.2-201ENST00000610631 239 ntBASIC1.22□□□□□ -2.21
PCDH18Q9HCL0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PCDH18Q9HCL0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.21□□□□□ -2.22
PCDH18Q9HCL0 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
PCDH18Q9HCL0 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
PCDH18Q9HCL0 RNU7-161P-201ENST00000517289 62 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms