Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 MIR4536-1-201ENST00000583537 88 ntBASIC0.94□□□□□ -2.26
HIST1H2AJQ99878 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H2AJQ99878 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
HIST1H2AJQ99878 SNORD18A-201ENST00000363753 72 ntBASIC0.93□□□□□ -2.26
HIST1H2AJQ99878 Y_RNA.338-201ENST00000365320 114 ntBASIC0.93□□□□□ -2.26
HIST1H2AJQ99878 MIR608-201ENST00000384820 100 ntBASIC0.93□□□□□ -2.26
HIST1H2AJQ99878 RNU6-65P-201ENST00000516332 98 ntBASIC0.93□□□□□ -2.26
HIST1H2AJQ99878 U6.100-201ENST00000636230 99 ntBASIC0.93□□□□□ -2.26
HIST1H2AJQ99878 RNU6-219P-201ENST00000364728 107 ntBASIC0.92□□□□□ -2.26
HIST1H2AJQ99878 Y_RNA.620-201ENST00000411009 88 ntBASIC0.92□□□□□ -2.26
HIST1H2AJQ99878 RNU6-1265P-201ENST00000516342 103 ntBASIC0.92□□□□□ -2.26
HIST1H2AJQ99878 RNU6-762P-201ENST00000517107 102 ntBASIC0.92□□□□□ -2.26
HIST1H2AJQ99878 Y_RNA.4-201ENST00000362333 112 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 RNA5SP403-201ENST00000363598 108 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 Y_RNA.191-201ENST00000363972 113 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 RNY1P8-201ENST00000383970 114 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 SNORD28-201ENST00000384706 75 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 AL603825.1-201ENST00000438481 80 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 RNU7-104P-201ENST00000459398 79 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 RNU6-135P-201ENST00000516769 101 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 AC244669.1-204ENST00000621564 178 ntBASIC0.91□□□□□ -2.26
HIST1H2AJQ99878 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
HIST1H2AJQ99878 RNU4-32P-201ENST00000363404 141 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 RNU6-1229P-201ENST00000364295 107 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 SNORD73B-201ENST00000364394 72 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 SNORD115-27-201ENST00000364430 82 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 RNU6-321P-201ENST00000410912 106 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 RNU6-1053P-201ENST00000515930 101 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 MIR4639-201ENST00000584938 69 ntBASIC0.9□□□□□ -2.27
HIST1H2AJQ99878 MIRLET7F1-201ENST00000362202 87 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 RNA5SP432-201ENST00000362480 116 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 RNY1P10-201ENST00000363268 113 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 RNU6-132P-201ENST00000383863 107 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
HIST1H2AJQ99878 MIR494-201ENST00000349529 81 ntBASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 SNORA36.2-201ENST00000384004 127 ntBASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 RNU6-675P-201ENST00000384236 104 ntBASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 RNA5SP47-201ENST00000517230 109 ntBASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H2AJQ99878 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 RNU6-633P-201ENST00000362612 103 ntBASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 MIR450A2-201ENST00000385022 100 ntBASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 RNU7-13P-201ENST00000516413 62 ntBASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.87□□□□□ -2.27
HIST1H2AJQ99878 MIR337-201ENST00000362281 93 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 Y_RNA.73-201ENST00000362910 113 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 RNY1P1-201ENST00000364372 112 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 RNU4-45P-201ENST00000365469 141 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 SNORD101-201ENST00000384027 73 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 RNU6-811P-201ENST00000384069 107 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 Y_RNA.596-201ENST00000410462 109 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 RNA5SP94-201ENST00000516917 108 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 MIR4696-201ENST00000581431 70 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 AC062037.1-201ENST00000605302 128 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 IGLL4P-201ENST00000614590 133 ntBASIC0.86□□□□□ -2.27
HIST1H2AJQ99878 RNU6-509P-201ENST00000363519 107 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 RNA5SP292-201ENST00000390974 118 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 MIR3064-201ENST00000581130 66 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 MIR3124-201ENST00000582636 67 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 AC067863.3-201ENST00000624172 122 ntBASIC0.85□□□□□ -2.27
HIST1H2AJQ99878 RNU6-664P-201ENST00000362381 107 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 SNORA36.1-201ENST00000363424 132 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 SCARNA16.5-201ENST00000517114 183 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 MIR3920-201ENST00000581751 86 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 AC104996.3-201ENST00000590718 94 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 MTRNR2L2-201ENST00000604882 87 ntBASIC0.84□□□□□ -2.27
HIST1H2AJQ99878 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 RNU6-497P-201ENST00000365316 104 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 Y_RNA.508-201ENST00000384502 114 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 MIR519C-201ENST00000385053 87 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 MIR518E-201ENST00000385252 88 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 MIR548U-201ENST00000390728 81 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 MIR548L-201ENST00000408303 86 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 Y_RNA.611-201ENST00000410682 108 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 RNU7-153P-201ENST00000516455 62 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 MIR548BB-201ENST00000626714 66 ntBASIC0.83□□□□□ -2.28
HIST1H2AJQ99878 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 Y_RNA.207-201ENST00000364142 106 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 MIR1236-201ENST00000408340 102 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 RNU6-287P-201ENST00000516230 98 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 RN7SKP12-201ENST00000516275 143 ntBASIC0.82□□□□□ -2.28
HIST1H2AJQ99878 Y_RNA.239-201ENST00000364444 113 ntBASIC0.81□□□□□ -2.28
HIST1H2AJQ99878 RNU6-726P-201ENST00000364680 107 ntBASIC0.81□□□□□ -2.28
HIST1H2AJQ99878 SNORD115-44-201ENST00000365391 82 ntBASIC0.81□□□□□ -2.28
HIST1H2AJQ99878 Y_RNA.491-201ENST00000384417 107 ntBASIC0.81□□□□□ -2.28
HIST1H2AJQ99878 RNY4P29-201ENST00000410801 97 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 257.3 ms