Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU6-1260P-201ENST00000362944 107 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 Y_RNA.273-201ENST00000364703 102 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 MIR519A1-201ENST00000385257 85 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
NPAS1Q99742 Y_RNA.508-201ENST00000384502 114 ntBASIC0.43□□□□□ -2.34
NPAS1Q99742 RNU2-59P-201ENST00000410482 191 ntBASIC0.43□□□□□ -2.34
NPAS1Q99742 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
NPAS1Q99742 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 Y_RNA.118-201ENST00000363300 101 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 RNA5SP403-201ENST00000363598 108 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 RNU6-1163P-201ENST00000364516 107 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 MIR181B2-201ENST00000385004 89 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
NPAS1Q99742 MIR6515-201ENST00000619843 57 ntBASIC0.42□□□□□ -2.34
NPAS1Q99742 Y_RNA.423-201ENST00000384057 113 ntBASIC0.41□□□□□ -2.34
NPAS1Q99742 RNU6-1113P-201ENST00000384348 107 ntBASIC0.41□□□□□ -2.34
NPAS1Q99742 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
NPAS1Q99742 Y_RNA.601-201ENST00000410500 113 ntBASIC0.41□□□□□ -2.34
NPAS1Q99742 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 SNORD36A-201ENST00000362874 73 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 RNU6-1290P-201ENST00000362957 109 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 RNU6-726P-201ENST00000364680 107 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 RNU6-1325P-201ENST00000364905 105 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 Y_RNA.629-201ENST00000411368 105 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 MIR4711-201ENST00000578274 70 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 MIR3613-201ENST00000579844 87 ntBASIC0.4□□□□□ -2.35
NPAS1Q99742 Y_RNA.36-201ENST00000362602 112 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 Y_RNA.95-201ENST00000363079 95 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 MIR489-201ENST00000384923 84 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 RNU6-466P-201ENST00000391224 103 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 RNU6-795P-201ENST00000516323 103 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 MIR4439-201ENST00000583746 80 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
NPAS1Q99742 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 SNORA51.5-201ENST00000384126 131 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 AL161932.1-201ENST00000437408 146 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 SCARNA23-201ENST00000516060 130 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 RNU6-589P-201ENST00000516485 107 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 Y_RNA.709-201ENST00000516952 92 ntBASIC0.38□□□□□ -2.35
NPAS1Q99742 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
NPAS1Q99742 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 RNU6-813P-201ENST00000384691 107 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 SNORA19.1-201ENST00000410656 129 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 AC073261.1-201ENST00000429409 121 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 uc_338.28-201ENST00000612082 187 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 PVT1_3.1-201ENST00000620853 95 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 TRDV1-202ENST00000621643 102 ntBASIC0.37□□□□□ -2.35
NPAS1Q99742 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 RNU6-1244P-201ENST00000363614 108 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 RNU6-756P-201ENST00000383997 107 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 RNU6-1126P-201ENST00000384002 107 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 Y_RNA.467-201ENST00000384297 102 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 RNU7-74P-201ENST00000459104 62 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 RNU7-129P-201ENST00000516128 62 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 AC103810.7-201ENST00000607821 91 ntBASIC0.36□□□□□ -2.35
NPAS1Q99742 Y_RNA.78-201ENST00000362970 110 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 RNU6-957P-201ENST00000363652 99 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 Y_RNA.291-201ENST00000364886 113 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 MIR598-201ENST00000384868 97 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 RNU6-904P-201ENST00000516206 101 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 RNU6-1265P-201ENST00000516342 103 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 AC025521.1-201ENST00000621624 286 ntBASIC0.35□□□□□ -2.35
NPAS1Q99742 SNORD115-44-201ENST00000365391 82 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 SNORA2A-201ENST00000383885 135 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 Y_RNA.466-201ENST00000384294 113 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 RNU6-106P-201ENST00000384405 107 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 RNU6-269P-201ENST00000391077 97 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 RNU6-554P-201ENST00000410466 106 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 MIR3920-201ENST00000581751 86 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 AC012531.4-201ENST00000616509 177 ntBASIC0.34□□□□□ -2.36
NPAS1Q99742 RNU6-509P-201ENST00000363519 107 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 MIR590-201ENST00000385008 97 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 SNORD41.1-201ENST00000391000 69 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
NPAS1Q99742 AL031737.1-201ENST00000450125 223 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
NPAS1Q99742 Y_RNA.96-201ENST00000363092 109 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 MIR760-201ENST00000390220 80 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 Y_RNA.596-201ENST00000410462 109 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 snoU13.11-201ENST00000459219 104 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 RNU6-1057P-201ENST00000517162 102 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 MIR548Z-201ENST00000584743 97 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.32□□□□□ -2.36
NPAS1Q99742 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 SNORD20-201ENST00000384550 80 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 RNU6-65P-201ENST00000516332 98 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 Y_RNA.705-201ENST00000516862 110 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 AL513043.2-201ENST00000573941 143 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 MIR4777-201ENST00000583710 86 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms