Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
PNKPQ96T60 MIR573-201ENST00000384964 99 ntBASIC0.97□□□□□ -2.25
PNKPQ96T60 snoU13.11-201ENST00000459219 104 ntBASIC0.97□□□□□ -2.25
PNKPQ96T60 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
PNKPQ96T60 AC026421.1-201ENST00000519101 163 ntBASIC0.97□□□□□ -2.25
PNKPQ96T60 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.97□□□□□ -2.25
PNKPQ96T60 MIR599-201ENST00000385069 95 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 MIR519A1-201ENST00000385257 85 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 MIR644A-201ENST00000385262 94 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 MIR3612-201ENST00000579753 87 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.96□□□□□ -2.26
PNKPQ96T60 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 Y_RNA.609-201ENST00000410669 89 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 AL161932.1-201ENST00000437408 146 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 AC097635.1-201ENST00000450678 155 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
PNKPQ96T60 AC006254.2-201ENST00000603259 279 ntBASIC0.95□□□□□ -2.26
PNKPQ96T60 RNU6-1260P-201ENST00000362944 107 ntBASIC0.94□□□□□ -2.26
PNKPQ96T60 RNU6-1134P-201ENST00000365156 101 ntBASIC0.94□□□□□ -2.26
PNKPQ96T60 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
PNKPQ96T60 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
PNKPQ96T60 Y_RNA.648-201ENST00000459455 110 ntBASIC0.94□□□□□ -2.26
PNKPQ96T60 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
PNKPQ96T60 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.94□□□□□ -2.26
PNKPQ96T60 RNU6-957P-201ENST00000363652 99 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 Y_RNA.221-201ENST00000364248 96 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PNKPQ96T60 RNU6-524P-201ENST00000384270 107 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 AC244505.6-201ENST00000452829 130 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 RNU7-85P-201ENST00000458851 63 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
PNKPQ96T60 RNY1P4-201ENST00000384595 115 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 RNU6-519P-201ENST00000410590 108 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 AL606490.4-201ENST00000423117 127 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
PNKPQ96T60 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 MIR4679-1-201ENST00000637619 75 ntBASIC0.92□□□□□ -2.26
PNKPQ96T60 Y_RNA.17-201ENST00000362433 111 ntBASIC0.91□□□□□ -2.26
PNKPQ96T60 Y_RNA.283-201ENST00000364798 112 ntBASIC0.91□□□□□ -2.26
PNKPQ96T60 SNORD4B-201ENST00000459083 72 ntBASIC0.91□□□□□ -2.26
PNKPQ96T60 MIR5000-201ENST00000577717 103 ntBASIC0.91□□□□□ -2.26
PNKPQ96T60 MIR4668-201ENST00000582284 70 ntBASIC0.91□□□□□ -2.26
PNKPQ96T60 SNORD115-24-201ENST00000363528 82 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 SNORD116-22-201ENST00000384430 92 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 RNU6-466P-201ENST00000391224 103 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 RNU6-402P-201ENST00000410678 103 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 RNU6-267P-201ENST00000516714 103 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.9□□□□□ -2.27
PNKPQ96T60 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 TRDV1-202ENST00000621643 102 ntBASIC0.9□□□□□ -2.27
PNKPQ96T60 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
PNKPQ96T60 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 Y_RNA.558-201ENST00000384685 113 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 MIR598-201ENST00000384868 97 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
PNKPQ96T60 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 Y_RNA.593-201ENST00000410292 98 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 RNU6-75P-201ENST00000515944 104 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 RNU6-469P-201ENST00000516253 101 ntBASIC0.89□□□□□ -2.27
PNKPQ96T60 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.89□□□□□ -2.27
PNKPQ96T60 MIR18A-201ENST00000362310 71 ntBASIC0.88□□□□□ -2.27
PNKPQ96T60 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
PNKPQ96T60 RNU6-762P-201ENST00000517107 102 ntBASIC0.88□□□□□ -2.27
PNKPQ96T60 MIR4536-1-201ENST00000583537 88 ntBASIC0.88□□□□□ -2.27
PNKPQ96T60 PVT1_3.1-201ENST00000620853 95 ntBASIC0.88□□□□□ -2.27
PNKPQ96T60 SNORD18A-201ENST00000363753 72 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 SNORD73B-201ENST00000364394 72 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 RNU6-219P-201ENST00000364728 107 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 Y_RNA.540-201ENST00000384638 111 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 Y_RNA.620-201ENST00000411009 88 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 RNU6-65P-201ENST00000516332 98 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 RNU7-161P-201ENST00000517289 62 ntBASIC0.87□□□□□ -2.27
PNKPQ96T60 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
PNKPQ96T60 U6.100-201ENST00000636230 99 ntBASIC0.86□□□□□ -2.27
PNKPQ96T60 RNU4-32P-201ENST00000363404 141 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 SNORD115-27-201ENST00000364430 82 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 RNU6-1265P-201ENST00000516342 103 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
PNKPQ96T60 MIR494-201ENST00000349529 81 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 MIRLET7F1-201ENST00000362202 87 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 RNA5SP403-201ENST00000363598 108 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 RNU7-104P-201ENST00000459398 79 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 RNU6-135P-201ENST00000516769 101 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 MIR4639-201ENST00000584938 69 ntBASIC0.84□□□□□ -2.27
PNKPQ96T60 RNY1P1-201ENST00000364372 112 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 RNU6-132P-201ENST00000383863 107 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 RNU6-675P-201ENST00000384236 104 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms