Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RNU7-195P-201ENST00000458793 62 ntBASIC1.04□□□□□ -2.24
HAPLN3Q96S86 snoU13.11-201ENST00000459219 104 ntBASIC1.04□□□□□ -2.24
HAPLN3Q96S86 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
HAPLN3Q96S86 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
HAPLN3Q96S86 AC022709.1-201ENST00000615967 87 ntBASIC1.04□□□□□ -2.24
HAPLN3Q96S86 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HAPLN3Q96S86 RNU6-497P-201ENST00000365316 104 ntBASIC1.03□□□□□ -2.24
HAPLN3Q96S86 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
HAPLN3Q96S86 MIR519A1-201ENST00000385257 85 ntBASIC1.03□□□□□ -2.24
HAPLN3Q96S86 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HAPLN3Q96S86 RNU6-535P-201ENST00000384722 107 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 MIR520H-201ENST00000385126 88 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 SNORA26.2-201ENST00000390922 122 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 AL161932.1-201ENST00000437408 146 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 SNORD4B-201ENST00000459083 72 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.648-201ENST00000459455 110 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.73-201ENST00000362910 113 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 SNORD115-27-201ENST00000364430 82 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 RNU6-243P-201ENST00000391140 107 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 RNU6-592P-201ENST00000411333 103 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 RN7SKP12-201ENST00000516275 143 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 AP003327.1-201ENST00000529684 127 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
HAPLN3Q96S86 RNU6-957P-201ENST00000363652 99 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNU6-820P-201ENST00000384273 107 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNU6-1152P-201ENST00000384576 107 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.540-201ENST00000384638 111 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 AL606490.4-201ENST00000423117 127 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNU6-75P-201ENST00000515944 104 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 SNORA72.7-201ENST00000516349 94 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNA5SP480-201ENST00000516840 109 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
HAPLN3Q96S86 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.32-201ENST00000362589 110 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 RNU6-633P-201ENST00000362612 103 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 RNU6-1260P-201ENST00000362944 107 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 RNY1P1-201ENST00000364372 112 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 MIR598-201ENST00000384868 97 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 MIR7-2-201ENST00000384970 110 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 RNU6-519P-201ENST00000410590 108 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.809-201ENST00000516058 95 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 AC138907.6-201ENST00000568401 126 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 AC138869.1-201ENST00000568623 124 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 IGLL4P-201ENST00000614590 133 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
HAPLN3Q96S86 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
HAPLN3Q96S86 RNU6-509P-201ENST00000363519 107 ntBASIC0.98□□□□□ -2.25
HAPLN3Q96S86 Y_RNA.283-201ENST00000364798 112 ntBASIC0.98□□□□□ -2.25
HAPLN3Q96S86 RNA5SP173-201ENST00000364857 136 ntBASIC0.98□□□□□ -2.25
HAPLN3Q96S86 AC002350.1-201ENST00000490759 375 ntBASIC0.98□□□□□ -2.25
HAPLN3Q96S86 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.98□□□□□ -2.25
HAPLN3Q96S86 RNU6-573P-201ENST00000383938 106 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 MIR599-201ENST00000385069 95 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 AC097635.1-201ENST00000450678 155 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 AC022137.1-201ENST00000483735 151 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 MIR548BB-201ENST00000626714 66 ntBASIC0.97□□□□□ -2.25
HAPLN3Q96S86 SNORD114-26-201ENST00000363543 72 ntBASIC0.96□□□□□ -2.26
HAPLN3Q96S86 RNU6-979P-201ENST00000383896 107 ntBASIC0.96□□□□□ -2.26
HAPLN3Q96S86 RNU6-524P-201ENST00000384270 107 ntBASIC0.96□□□□□ -2.26
HAPLN3Q96S86 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
HAPLN3Q96S86 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.96□□□□□ -2.26
HAPLN3Q96S86 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
HAPLN3Q96S86 RNU6-132P-201ENST00000383863 107 ntBASIC0.95□□□□□ -2.26
HAPLN3Q96S86 RNU7-153P-201ENST00000516455 62 ntBASIC0.95□□□□□ -2.26
HAPLN3Q96S86 MIR5588-201ENST00000581890 63 ntBASIC0.95□□□□□ -2.26
HAPLN3Q96S86 MIR4536-1-201ENST00000583537 88 ntBASIC0.95□□□□□ -2.26
HAPLN3Q96S86 Y_RNA.36-201ENST00000362602 112 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 Y_RNA.221-201ENST00000364248 96 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 MIR644A-201ENST00000385262 94 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 TRDV1-202ENST00000621643 102 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.94□□□□□ -2.26
HAPLN3Q96S86 AC006160.2-201ENST00000637708 154 ntBASIC0.94□□□□□ -2.26
HAPLN3Q96S86 RNU4-32P-201ENST00000363404 141 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 RNU6-466P-201ENST00000391224 103 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 Y_RNA.611-201ENST00000410682 108 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 RNU6-65P-201ENST00000516332 98 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 RNU6-1265P-201ENST00000516342 103 ntBASIC0.93□□□□□ -2.26
HAPLN3Q96S86 Y_RNA.174-201ENST00000363781 105 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HAPLN3Q96S86 RNU6-787P-201ENST00000384032 107 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 MIR573-201ENST00000384964 99 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 MIR519C-201ENST00000385053 87 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HAPLN3Q96S86 RNA5SP292-201ENST00000390974 118 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 U6.100-201ENST00000636230 99 ntBASIC0.92□□□□□ -2.26
HAPLN3Q96S86 MIRLET7F1-201ENST00000362202 87 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms