Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.65□□□□□ -2.51
VPS35Q96QK1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.65□□□□□ -2.51
VPS35Q96QK1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.65□□□□□ -2.51
VPS35Q96QK1 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 MIR9-2-201ENST00000384838 87 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 TRDV1-202ENST00000621643 102 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 AC021753.1-201ENST00000635724 168 ntBASIC-0.66□□□□□ -2.52
VPS35Q96QK1 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.67□□□□□ -2.52
VPS35Q96QK1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
VPS35Q96QK1 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
VPS35Q96QK1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.67□□□□□ -2.52
VPS35Q96QK1 MIR1255B1-201ENST00000636325 63 ntBASIC-0.67□□□□□ -2.52
VPS35Q96QK1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 RNU4-11P-201ENST00000365287 132 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 RNU6-154P-201ENST00000384306 106 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 RNU6-243P-201ENST00000391140 107 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 MIR4436A-201ENST00000585278 85 ntBASIC-0.68□□□□□ -2.52
VPS35Q96QK1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
VPS35Q96QK1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 RNA5SP368-201ENST00000364298 116 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 MT-TY-201ENST00000387409 66 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 AP002392.1-201ENST00000537692 208 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 MIR3121-201ENST00000579680 77 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 AC108676.2-201ENST00000605225 163 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 U6.100-201ENST00000636230 99 ntBASIC-0.69□□□□□ -2.52
VPS35Q96QK1 MIR224-201ENST00000384889 81 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 AL161932.1-201ENST00000437408 146 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 RPS29P8-201ENST00000445109 171 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 SPINT5P-201ENST00000448174 155 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 MIR4503-201ENST00000582187 83 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 AC141273.2-201ENST00000618989 130 ntBASIC-0.7□□□□□ -2.52
VPS35Q96QK1 SNORD36A-201ENST00000362874 73 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 RNU6-915P-201ENST00000364943 103 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 RNU6-196P-201ENST00000384315 107 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 SNORD56B-201ENST00000384713 71 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 MIR759-201ENST00000390224 91 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 RNU6-460P-201ENST00000391158 108 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 SNORA7.5-201ENST00000410672 110 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.71□□□□□ -2.52
VPS35Q96QK1 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 MTND3P2-201ENST00000438452 342 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 RNU7-197P-201ENST00000458836 62 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 AC145423.2-201ENST00000610631 239 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 AC093726.3-201ENST00000637588 150 ntBASIC-0.72□□□□□ -2.52
VPS35Q96QK1 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 SNORA49-201ENST00000386157 136 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 SNORA3B-201ENST00000391305 131 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 AL512310.12-203ENST00000640543 90 ntBASIC-0.73□□□□□ -2.53
VPS35Q96QK1 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 RN7SKP19-201ENST00000516016 252 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 RNU6-861P-201ENST00000516745 106 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 AC007012.1-201ENST00000567192 175 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 MIR4280-201ENST00000582178 76 ntBASIC-0.74□□□□□ -2.53
VPS35Q96QK1 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 SNORD38.1-201ENST00000363863 68 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 RNU6-694P-201ENST00000364071 147 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 MIR548G-201ENST00000408442 89 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 RNA5SP136-201ENST00000410906 107 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 AC074198.2-201ENST00000508153 258 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 MIR6086-201ENST00000638065 55 ntBASIC-0.75□□□□□ -2.53
VPS35Q96QK1 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 RNU6-957P-201ENST00000363652 99 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 RNU6-151P-201ENST00000364158 107 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 RNU6-647P-201ENST00000364243 107 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 MIR548D2-201ENST00000384955 97 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 RNU6-90P-201ENST00000606352 106 ntBASIC-0.76□□□□□ -2.53
VPS35Q96QK1 MIR20A-201ENST00000362279 71 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 RNU6-574P-201ENST00000384265 107 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 325.3 ms