Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MIR548H5-201ENST00000580314 60 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 RNA5SP117-201ENST00000365294 118 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 RNU7-195P-201ENST00000458793 62 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 MIR4439-201ENST00000583746 80 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 AC025521.1-201ENST00000621624 286 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.705-201ENST00000516862 110 ntBASIC0.59□□□□□ -2.31
FOXN4Q96NZ1 U7.3-201ENST00000616123 62 ntBASIC0.59□□□□□ -2.31
FOXN4Q96NZ1 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
FOXN4Q96NZ1 RNU6-1125P-201ENST00000363601 107 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 MIR488-201ENST00000365739 83 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNU6-480P-201ENST00000384332 107 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNY4P30-201ENST00000410216 95 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNU6-887P-201ENST00000410660 100 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 AL513043.2-201ENST00000573941 143 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 RNU7-10P-201ENST00000607194 63 ntBASIC0.58□□□□□ -2.32
FOXN4Q96NZ1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.190-201ENST00000363964 101 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.290-201ENST00000364879 114 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 RNU6-243P-201ENST00000391140 107 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 RNU6-972P-201ENST00000391208 107 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 RNU6-1254P-201ENST00000391266 104 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.809-201ENST00000516058 95 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 AC138869.1-201ENST00000568623 124 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 MIR6779-201ENST00000617283 64 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 MIR2052-201ENST00000636055 55 ntBASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
FOXN4Q96NZ1 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 SNORD36A-201ENST00000362874 73 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 SNORD58A-201ENST00000383875 65 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNU6-110P-201ENST00000384508 104 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNY1P7-201ENST00000384743 110 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 MIR599-201ENST00000385069 95 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 AL161932.1-201ENST00000437408 146 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNU6-158P-201ENST00000517104 100 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 MIR3678-201ENST00000578455 94 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 MALAT1.1-201ENST00000618249 95 ntBASIC0.56□□□□□ -2.32
FOXN4Q96NZ1 RNU6-1131P-201ENST00000364955 107 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 SNORA36.2-201ENST00000384004 127 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 snoU13.11-201ENST00000459219 104 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 RNU6-469P-201ENST00000516253 101 ntBASIC0.55□□□□□ -2.32
FOXN4Q96NZ1 Y_RNA.96-201ENST00000363092 109 ntBASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 SNORD115-24-201ENST00000363528 82 ntBASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 AC097635.1-201ENST00000450678 155 ntBASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 AC244505.6-201ENST00000452829 130 ntBASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.54□□□□□ -2.32
FOXN4Q96NZ1 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 RNU6-1298P-201ENST00000362456 101 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 RNU6-957P-201ENST00000363652 99 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 RNU6-49P-201ENST00000384256 107 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
FOXN4Q96NZ1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
FOXN4Q96NZ1 RNU6-1260P-201ENST00000362944 107 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 SNORD18A-201ENST00000363753 72 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP170-201ENST00000517150 101 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 AC244669.1-204ENST00000621564 178 ntBASIC0.52□□□□□ -2.33
FOXN4Q96NZ1 SNORD116-10-201ENST00000363791 102 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 Y_RNA.220-201ENST00000364244 109 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 SNORD28-201ENST00000384706 75 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 Y_RNA.609-201ENST00000410669 89 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 RNU7-85P-201ENST00000458851 63 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 AC026421.1-201ENST00000519101 163 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 MIR5582-201ENST00000579697 68 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 TRDV1-202ENST00000621643 102 ntBASIC0.51□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 Y_RNA.283-201ENST00000364798 112 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 RNU6-466P-201ENST00000391224 103 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 RNU6-519P-201ENST00000410590 108 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 RNU7-104P-201ENST00000459398 79 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 Y_RNA.648-201ENST00000459455 110 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 Y_RNA.694-201ENST00000516677 117 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms