Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-1006P-201ENST00000516998 103 ntBASIC0.31□□□□□ -2.36
CCDC138Q96M89 RNU6-90P-201ENST00000606352 106 ntBASIC0.31□□□□□ -2.36
CCDC138Q96M89 U6.95-201ENST00000636931 70 ntBASIC0.31□□□□□ -2.36
CCDC138Q96M89 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC138Q96M89 Y_RNA.35-201ENST00000362601 101 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 RNU6-1260P-201ENST00000362944 107 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 Y_RNA.423-201ENST00000384057 113 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 RNU6-187P-201ENST00000384139 106 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 AL353813.1-201ENST00000440700 253 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 Y_RNA.649-201ENST00000459077 103 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 RNU6-659P-201ENST00000516454 104 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 AC007012.1-201ENST00000567192 175 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 MIR4802-201ENST00000581881 80 ntBASIC0.3□□□□□ -2.36
CCDC138Q96M89 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.3□□□□□ -2.36
CCDC138Q96M89 Y_RNA.218-201ENST00000364218 104 ntBASIC0.29□□□□□ -2.36
CCDC138Q96M89 Y_RNA.309-201ENST00000365046 111 ntBASIC0.29□□□□□ -2.36
CCDC138Q96M89 MIR548M-201ENST00000408260 86 ntBASIC0.29□□□□□ -2.36
CCDC138Q96M89 RNU7-106P-201ENST00000459514 67 ntBASIC0.29□□□□□ -2.36
CCDC138Q96M89 RNA5SP67-201ENST00000516422 131 ntBASIC0.29□□□□□ -2.36
CCDC138Q96M89 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC138Q96M89 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 SNORD41.1-201ENST00000391000 69 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 MIR548G-201ENST00000408442 89 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 RNU6-758P-201ENST00000516292 89 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 AC069113.3-201ENST00000521019 150 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 AL162376.1-201ENST00000624117 175 ntBASIC0.28□□□□□ -2.36
CCDC138Q96M89 RNA5SP331-201ENST00000364986 107 ntBASIC0.27□□□□□ -2.37
CCDC138Q96M89 MIR516A2-201ENST00000384888 90 ntBASIC0.27□□□□□ -2.37
CCDC138Q96M89 MIR516A1-201ENST00000385033 90 ntBASIC0.27□□□□□ -2.37
CCDC138Q96M89 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
CCDC138Q96M89 AL442128.1-201ENST00000615151 90 ntBASIC0.27□□□□□ -2.37
CCDC138Q96M89 SNORD116-14-201ENST00000383894 92 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 SNORD116-17-201ENST00000383929 92 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 RNU6-1201P-201ENST00000384227 107 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 SNORD116-15-201ENST00000384445 92 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 SNORD116-19-201ENST00000384729 92 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 RNA5SP25-201ENST00000410815 110 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
CCDC138Q96M89 Y_RNA.247-201ENST00000364500 92 ntBASIC0.25□□□□□ -2.37
CCDC138Q96M89 SNORD114-15-201ENST00000364687 72 ntBASIC0.25□□□□□ -2.37
CCDC138Q96M89 RNU6-524P-201ENST00000384270 107 ntBASIC0.25□□□□□ -2.37
CCDC138Q96M89 MIR548A3-201ENST00000385297 97 ntBASIC0.25□□□□□ -2.37
CCDC138Q96M89 RNU6-1254P-201ENST00000391266 104 ntBASIC0.24□□□□□ -2.37
CCDC138Q96M89 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.24□□□□□ -2.37
CCDC138Q96M89 SNORD33.1-201ENST00000516213 88 ntBASIC0.24□□□□□ -2.37
CCDC138Q96M89 MIR4752-201ENST00000579672 72 ntBASIC0.24□□□□□ -2.37
CCDC138Q96M89 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CCDC138Q96M89 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.24□□□□□ -2.37
CCDC138Q96M89 Y_RNA.173-201ENST00000363776 113 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 MIR548A1-201ENST00000385041 97 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 RNU7-13P-201ENST00000516413 62 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 AL670379.3-201ENST00000605040 251 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 AL035470.1-201ENST00000622571 220 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 MIR371B-201ENST00000638082 66 ntBASIC0.23□□□□□ -2.37
CCDC138Q96M89 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
CCDC138Q96M89 Y_RNA.57-201ENST00000362806 113 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 Y_RNA.323-201ENST00000365157 109 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 Y_RNA.377-201ENST00000365644 108 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 RNU6-959P-201ENST00000384671 107 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 RNU6-243P-201ENST00000391140 107 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 AC068339.1-201ENST00000526965 141 ntBASIC0.22□□□□□ -2.37
CCDC138Q96M89 TMSB4XP3-201ENST00000445144 114 ntBASIC0.21□□□□□ -2.38
CCDC138Q96M89 RNU6-1265P-201ENST00000516342 103 ntBASIC0.21□□□□□ -2.38
CCDC138Q96M89 MIR3920-201ENST00000581751 86 ntBASIC0.21□□□□□ -2.38
CCDC138Q96M89 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
CCDC138Q96M89 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
CCDC138Q96M89 RNU6-269P-201ENST00000391077 97 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 RNU7-74P-201ENST00000459104 62 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 RNU6-1333P-201ENST00000516162 93 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 MIR4694-201ENST00000578534 80 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 MIR5706-201ENST00000579841 80 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 MIR5190-201ENST00000581537 80 ntBASIC0.2□□□□□ -2.38
CCDC138Q96M89 SNORD114-31-201ENST00000363219 75 ntBASIC0.19□□□□□ -2.38
CCDC138Q96M89 RNA5SP128-201ENST00000365305 116 ntBASIC0.19□□□□□ -2.38
CCDC138Q96M89 RNU6-81P-201ENST00000365608 104 ntBASIC0.19□□□□□ -2.38
CCDC138Q96M89 MIR577-201ENST00000385196 96 ntBASIC0.19□□□□□ -2.38
CCDC138Q96M89 RNU1-29P-201ENST00000606574 126 ntBASIC0.19□□□□□ -2.38
CCDC138Q96M89 SNORD36A-201ENST00000362874 73 ntBASIC0.18□□□□□ -2.38
CCDC138Q96M89 RNU6-509P-201ENST00000363519 107 ntBASIC0.18□□□□□ -2.38
CCDC138Q96M89 RNU7-129P-201ENST00000516128 62 ntBASIC0.18□□□□□ -2.38
CCDC138Q96M89 U7.6-201ENST00000610841 64 ntBASIC0.18□□□□□ -2.38
CCDC138Q96M89 SNORD115-44-201ENST00000365391 82 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 Y_RNA.353-201ENST00000365440 108 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 Y_RNA.563-201ENST00000384707 108 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 AC008267.6-201ENST00000441664 139 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.17□□□□□ -2.38
CCDC138Q96M89 snoU13.11-201ENST00000459219 104 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 MTRNR2L2-201ENST00000604882 87 ntBASIC0.17□□□□□ -2.38
CCDC138Q96M89 RNU6-832P-201ENST00000363319 107 ntBASIC0.16□□□□□ -2.38
CCDC138Q96M89 U8.6-201ENST00000364939 135 ntBASIC0.16□□□□□ -2.38
CCDC138Q96M89 SNORD57-201ENST00000448188 72 ntBASIC0.16□□□□□ -2.38
CCDC138Q96M89 MIR5009-201ENST00000578736 100 ntBASIC0.16□□□□□ -2.38
CCDC138Q96M89 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
CCDC138Q96M89 RNY3P2-201ENST00000362918 102 ntBASIC0.15□□□□□ -2.39
CCDC138Q96M89 RNU6-1125P-201ENST00000363601 107 ntBASIC0.15□□□□□ -2.39
CCDC138Q96M89 RNU6-480P-201ENST00000384332 107 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms