Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.437-201ENST00000384113 113 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 MIR519A1-201ENST00000385257 85 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 AC093729.1-201ENST00000513074 128 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 RNU7-153P-201ENST00000516455 62 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 RNU6-228P-201ENST00000362700 106 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1260P-201ENST00000362944 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-787P-201ENST00000384032 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-811P-201ENST00000384069 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 AC097635.1-201ENST00000450678 155 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 MIR4666B-201ENST00000578142 81 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RMST_2.1-201ENST00000617263 136 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.313-201ENST00000365095 103 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 MIR1255A-201ENST00000408338 113 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.607-201ENST00000410597 98 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.685-201ENST00000516532 108 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 TRDV1-202ENST00000621643 102 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1275P-201ENST00000391087 107 ntBASIC1.04□□□□□ -2.24
PDLIM2Q96JY6 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PDLIM2Q96JY6 MIRLET7F1-201ENST00000362202 87 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-652P-201ENST00000365488 107 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-132P-201ENST00000383863 107 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR548U-201ENST00000390728 81 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 AL606490.4-201ENST00000423117 127 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.221-201ENST00000364248 96 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP292-201ENST00000390974 118 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP225-201ENST00000410874 135 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 SNORA25.13-201ENST00000516395 103 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 SNORA18.5-201ENST00000516616 101 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC140658.3-201ENST00000567603 271 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR4796-201ENST00000580742 81 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR3064-201ENST00000581130 66 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC104996.3-201ENST00000590718 94 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR1287-201ENST00000408492 90 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.316-201ENST00000365118 111 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.491-201ENST00000384417 107 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
PDLIM2Q96JY6 AC244505.6-201ENST00000452829 130 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 AC002350.1-201ENST00000490759 375 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 U6.100-201ENST00000636230 99 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 SNORD115-24-201ENST00000363528 82 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 MIR4696-201ENST00000581431 70 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 RNU6-638P-201ENST00000516582 104 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 MIR644A-201ENST00000385262 94 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
PDLIM2Q96JY6 RNU6-129P-201ENST00000391022 107 ntBASIC0.95□□□□□ -2.26
PDLIM2Q96JY6 RNU6-279P-201ENST00000391297 101 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 312.9 ms