Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 IGLL4P-201ENST00000614590 133 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 RNU6-957P-201ENST00000363652 99 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 RNY1P1-201ENST00000364372 112 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.283-201ENST00000364798 112 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 RNU6-1152P-201ENST00000384576 107 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 MIR518E-201ENST00000385252 88 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
PTCD3Q96EY7 RNU6-592P-201ENST00000411333 103 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 AL606490.4-201ENST00000423117 127 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 AL136317.1-201ENST00000612653 226 ntBASIC1.02□□□□□ -2.25
PTCD3Q96EY7 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 AC097635.1-201ENST00000450678 155 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 AC244505.6-201ENST00000452829 130 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
PTCD3Q96EY7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
PTCD3Q96EY7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
PTCD3Q96EY7 RNU6-509P-201ENST00000363519 107 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 RNA5SP173-201ENST00000364857 136 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 RNU6-524P-201ENST00000384270 107 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 MIR599-201ENST00000385069 95 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 AC022137.1-201ENST00000483735 151 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PTCD3Q96EY7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1□□□□□ -2.25
PTCD3Q96EY7 RNU6-979P-201ENST00000383896 107 ntBASIC0.99□□□□□ -2.25
PTCD3Q96EY7 RNU6-573P-201ENST00000383938 106 ntBASIC0.99□□□□□ -2.25
PTCD3Q96EY7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
PTCD3Q96EY7 MIR4536-1-201ENST00000583537 88 ntBASIC0.99□□□□□ -2.25
PTCD3Q96EY7 MIR548BB-201ENST00000626714 66 ntBASIC0.99□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.355-201ENST00000365462 98 ntBASIC0.98□□□□□ -2.25
PTCD3Q96EY7 MIR5588-201ENST00000581890 63 ntBASIC0.98□□□□□ -2.25
PTCD3Q96EY7 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
PTCD3Q96EY7 TRDV1-202ENST00000621643 102 ntBASIC0.98□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 RNU6-132P-201ENST00000383863 107 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 MIR573-201ENST00000384964 99 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 RNU6-466P-201ENST00000391224 103 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 RNU7-153P-201ENST00000516455 62 ntBASIC0.97□□□□□ -2.25
PTCD3Q96EY7 Y_RNA.221-201ENST00000364248 96 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 MIR644A-201ENST00000385262 94 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 Y_RNA.611-201ENST00000410682 108 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
PTCD3Q96EY7 RNU6-65P-201ENST00000516332 98 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 RNU6-1265P-201ENST00000516342 103 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
PTCD3Q96EY7 RNU4-32P-201ENST00000363404 141 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 MIR519C-201ENST00000385053 87 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
PTCD3Q96EY7 snoU13.18-201ENST00000459483 104 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 MIR7111-201ENST00000619751 72 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 AC006160.2-201ENST00000637708 154 ntBASIC0.95□□□□□ -2.26
PTCD3Q96EY7 MIRLET7F1-201ENST00000362202 87 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 RNA5SP117-201ENST00000365294 118 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 RNA5SP292-201ENST00000390974 118 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 MIR3612-201ENST00000579753 87 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 MIR3064-201ENST00000581130 66 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 U6.100-201ENST00000636230 99 ntBASIC0.94□□□□□ -2.26
PTCD3Q96EY7 SNORD115-24-201ENST00000363528 82 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNA5SP403-201ENST00000363598 108 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNU6-1276P-201ENST00000365372 104 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNU6-787P-201ENST00000384032 107 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNU6-811P-201ENST00000384069 107 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNU7-171P-201ENST00000459581 62 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 RNU7-161P-201ENST00000517289 62 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 AL078603.1-201ENST00000603824 313 ntBASIC0.93□□□□□ -2.26
PTCD3Q96EY7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
PTCD3Q96EY7 MIR1236-201ENST00000408340 102 ntBASIC0.92□□□□□ -2.26
PTCD3Q96EY7 AC244098.3-201ENST00000424803 96 ntBASIC0.92□□□□□ -2.26
PTCD3Q96EY7 AC093729.1-201ENST00000513074 128 ntBASIC0.92□□□□□ -2.26
PTCD3Q96EY7 MIR4696-201ENST00000581431 70 ntBASIC0.92□□□□□ -2.26
PTCD3Q96EY7 RNU6-664P-201ENST00000362381 107 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
PTCD3Q96EY7 RNA5SP220-201ENST00000516298 104 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 SNORA18.5-201ENST00000516616 101 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 AC104996.3-201ENST00000590718 94 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 MIR1245B-201ENST00000636115 69 ntBASIC0.91□□□□□ -2.26
PTCD3Q96EY7 Y_RNA.426-201ENST00000384068 113 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 RNU6-242P-201ENST00000384359 107 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 SNORD28-201ENST00000384706 75 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.9□□□□□ -2.27
PTCD3Q96EY7 AC140658.3-201ENST00000567603 271 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
PTCD3Q96EY7 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
PTCD3Q96EY7 Y_RNA.491-201ENST00000384417 107 ntBASIC0.89□□□□□ -2.27
PTCD3Q96EY7 SNORD90-201ENST00000391145 111 ntBASIC0.89□□□□□ -2.27
PTCD3Q96EY7 Y_RNA.596-201ENST00000410462 109 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms