Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 AC244505.6-201ENST00000452829 130 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 RNU7-195P-201ENST00000458793 62 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 RNU7-106P-201ENST00000459514 67 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 RNU6-158P-201ENST00000517104 100 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
CTHRC1Q96CG8 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CTHRC1Q96CG8 MIR599-201ENST00000385069 95 ntBASIC0.76□□□□□ -2.29
CTHRC1Q96CG8 RNU6-887P-201ENST00000410660 100 ntBASIC0.76□□□□□ -2.29
CTHRC1Q96CG8 AC103810.7-201ENST00000607821 91 ntBASIC0.76□□□□□ -2.29
CTHRC1Q96CG8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CTHRC1Q96CG8 RNU6-1260P-201ENST00000362944 107 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 RNU6-644P-201ENST00000391155 98 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 MTATP8P2-201ENST00000435212 202 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 RNU6-168P-201ENST00000516189 101 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 MIR548Z-201ENST00000584743 97 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.75□□□□□ -2.29
CTHRC1Q96CG8 SNORD36A-201ENST00000362874 73 ntBASIC0.74□□□□□ -2.29
CTHRC1Q96CG8 SNORD115-24-201ENST00000363528 82 ntBASIC0.74□□□□□ -2.29
CTHRC1Q96CG8 Y_RNA.677-201ENST00000516401 85 ntBASIC0.74□□□□□ -2.29
CTHRC1Q96CG8 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CTHRC1Q96CG8 MIR4639-201ENST00000584938 69 ntBASIC0.74□□□□□ -2.29
CTHRC1Q96CG8 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CTHRC1Q96CG8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.73□□□□□ -2.29
CTHRC1Q96CG8 RNU7-61P-201ENST00000515897 61 ntBASIC0.73□□□□□ -2.29
CTHRC1Q96CG8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.73□□□□□ -2.29
CTHRC1Q96CG8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
CTHRC1Q96CG8 MTATP6P29-201ENST00000415057 132 ntBASIC0.72□□□□□ -2.29
CTHRC1Q96CG8 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
CTHRC1Q96CG8 RN7SL793P-201ENST00000583259 296 ntBASIC0.72□□□□□ -2.29
CTHRC1Q96CG8 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 SNORD58A-201ENST00000383875 65 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 RNU6-524P-201ENST00000384270 107 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 SNORD28-201ENST00000384706 75 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 RNA5SP89-201ENST00000410300 108 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 AL513043.2-201ENST00000573941 143 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 AC025521.1-201ENST00000621624 286 ntBASIC0.71□□□□□ -2.3
CTHRC1Q96CG8 SNORD116-10-201ENST00000363791 102 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 Y_RNA.348-201ENST00000365403 103 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 MIR216A-201ENST00000385063 110 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 AC244669.1-204ENST00000621564 178 ntBASIC0.7□□□□□ -2.3
CTHRC1Q96CG8 Y_RNA.374-201ENST00000365606 101 ntBASIC0.69□□□□□ -2.3
CTHRC1Q96CG8 MIR140-201ENST00000385282 100 ntBASIC0.69□□□□□ -2.3
CTHRC1Q96CG8 RNU6-466P-201ENST00000391224 103 ntBASIC0.69□□□□□ -2.3
CTHRC1Q96CG8 RNA5SP47-201ENST00000517230 109 ntBASIC0.69□□□□□ -2.3
CTHRC1Q96CG8 U7.3-201ENST00000616123 62 ntBASIC0.69□□□□□ -2.3
CTHRC1Q96CG8 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 RNA5SP94-201ENST00000516917 108 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 AC067863.3-201ENST00000624172 122 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
CTHRC1Q96CG8 RNA5SP403-201ENST00000363598 108 ntBASIC0.67□□□□□ -2.3
CTHRC1Q96CG8 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
CTHRC1Q96CG8 RNU6-162P-201ENST00000516228 103 ntBASIC0.67□□□□□ -2.3
CTHRC1Q96CG8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.67□□□□□ -2.3
CTHRC1Q96CG8 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
CTHRC1Q96CG8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CTHRC1Q96CG8 RNU6-905P-201ENST00000384434 107 ntBASIC0.66□□□□□ -2.3
CTHRC1Q96CG8 RNU7-104P-201ENST00000459398 79 ntBASIC0.66□□□□□ -2.3
CTHRC1Q96CG8 MIR4536-1-201ENST00000583537 88 ntBASIC0.66□□□□□ -2.3
CTHRC1Q96CG8 AC092634.7-201ENST00000621022 103 ntBASIC0.66□□□□□ -2.3
CTHRC1Q96CG8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CTHRC1Q96CG8 Y_RNA.220-201ENST00000364244 109 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 RNU6-65P-201ENST00000516332 98 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 RNU7-13P-201ENST00000516413 62 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 RNU7-161P-201ENST00000517289 62 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 TRDV1-202ENST00000621643 102 ntBASIC0.65□□□□□ -2.31
CTHRC1Q96CG8 RNU6-957P-201ENST00000363652 99 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 SNORD115-44-201ENST00000365391 82 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 RNU6-519P-201ENST00000410590 108 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 snoU13.11-201ENST00000459219 104 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 RNA5SP227-201ENST00000516184 113 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 RNA5SP268-201ENST00000516828 124 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 MALAT1.1-201ENST00000618249 95 ntBASIC0.64□□□□□ -2.31
CTHRC1Q96CG8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 RNU6-640P-201ENST00000363693 105 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.290-201ENST00000364879 114 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.62□□□□□ -2.31
CTHRC1Q96CG8 MIR193B-201ENST00000384907 83 ntBASIC0.62□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.62□□□□□ -2.31
CTHRC1Q96CG8 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms