Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC097635.1-201ENST00000450678 155 ntBASIC1.76□□□□□ -2.13
VTI1AQ96AJ9 RNU6-624P-201ENST00000363411 107 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 RNU6-478P-201ENST00000363904 110 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 AL450471.1-201ENST00000447509 127 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 AC138907.6-201ENST00000568401 126 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 AC138869.1-201ENST00000568623 124 ntBASIC1.75□□□□□ -2.13
VTI1AQ96AJ9 MIR1-1-201ENST00000362147 71 ntBASIC1.74□□□□□ -2.13
VTI1AQ96AJ9 MIR222-201ENST00000384992 110 ntBASIC1.74□□□□□ -2.13
VTI1AQ96AJ9 MIR599-201ENST00000385069 95 ntBASIC1.74□□□□□ -2.13
VTI1AQ96AJ9 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
VTI1AQ96AJ9 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
VTI1AQ96AJ9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.73□□□□□ -2.13
VTI1AQ96AJ9 RNU6-129P-201ENST00000391022 107 ntBASIC1.73□□□□□ -2.13
VTI1AQ96AJ9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.73□□□□□ -2.13
VTI1AQ96AJ9 U6.100-201ENST00000636230 99 ntBASIC1.73□□□□□ -2.13
VTI1AQ96AJ9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 Y_RNA.221-201ENST00000364248 96 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 MIR520F-201ENST00000384824 87 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 MIR548U-201ENST00000390728 81 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 RNU1-119P-201ENST00000391122 165 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 SNORD90-201ENST00000391145 111 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 MIR6504-201ENST00000613520 61 ntBASIC1.72□□□□□ -2.13
VTI1AQ96AJ9 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
VTI1AQ96AJ9 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
VTI1AQ96AJ9 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
VTI1AQ96AJ9 snoU13.18-201ENST00000459483 104 ntBASIC1.71□□□□□ -2.14
VTI1AQ96AJ9 SNORA63.2-201ENST00000362603 126 ntBASIC1.7□□□□□ -2.14
VTI1AQ96AJ9 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
VTI1AQ96AJ9 RMST_2.1-201ENST00000617263 136 ntBASIC1.7□□□□□ -2.14
VTI1AQ96AJ9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VTI1AQ96AJ9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VTI1AQ96AJ9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.69□□□□□ -2.14
VTI1AQ96AJ9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VTI1AQ96AJ9 AC067940.1-201ENST00000458411 300 ntBASIC1.69□□□□□ -2.14
VTI1AQ96AJ9 RNU6-315P-201ENST00000362666 107 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 MIR618-201ENST00000385287 98 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 AC244505.6-201ENST00000452829 130 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 SNORA31.14-201ENST00000516728 116 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 AL078603.1-201ENST00000603824 313 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 AL353770.2-201ENST00000620024 78 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 uc_338.16-201ENST00000621804 95 ntBASIC1.68□□□□□ -2.14
VTI1AQ96AJ9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
VTI1AQ96AJ9 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
VTI1AQ96AJ9 MIR4696-201ENST00000581431 70 ntBASIC1.67□□□□□ -2.14
VTI1AQ96AJ9 MTRNR2L2-201ENST00000604882 87 ntBASIC1.67□□□□□ -2.14
VTI1AQ96AJ9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 RNU6-161P-201ENST00000363051 106 ntBASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 RNU6-1108P-201ENST00000516308 104 ntBASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 RNU6-557P-201ENST00000516842 110 ntBASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 AC019288.1-201ENST00000557918 224 ntBASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 MIR4452-201ENST00000583004 71 ntBASIC1.66□□□□□ -2.14
VTI1AQ96AJ9 RNU6-664P-201ENST00000362381 107 ntBASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 SNORD101-201ENST00000384027 73 ntBASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 MIR520H-201ENST00000385126 88 ntBASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
VTI1AQ96AJ9 RNU6-42P-201ENST00000384165 107 ntBASIC1.64□□□□□ -2.15
VTI1AQ96AJ9 RNU1-123P-201ENST00000458950 160 ntBASIC1.64□□□□□ -2.15
VTI1AQ96AJ9 FGF7P7-201ENST00000514120 227 ntBASIC1.64□□□□□ -2.15
VTI1AQ96AJ9 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
VTI1AQ96AJ9 Y_RNA.239-201ENST00000364444 113 ntBASIC1.63□□□□□ -2.15
VTI1AQ96AJ9 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
VTI1AQ96AJ9 Y_RNA.596-201ENST00000410462 109 ntBASIC1.63□□□□□ -2.15
VTI1AQ96AJ9 RNA5SP102-201ENST00000516865 106 ntBASIC1.63□□□□□ -2.15
VTI1AQ96AJ9 MIRLET7A1-201ENST00000362295 80 ntBASIC1.62□□□□□ -2.15
VTI1AQ96AJ9 MIR889-201ENST00000401280 79 ntBASIC1.62□□□□□ -2.15
VTI1AQ96AJ9 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
VTI1AQ96AJ9 RNU6-776P-201ENST00000364403 104 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 RNU6-686P-201ENST00000364839 107 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 RNU6-1022P-201ENST00000365049 104 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 RNU6-939P-201ENST00000384634 107 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 MIR19B1-201ENST00000384829 87 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 SNORD124-201ENST00000459577 104 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
VTI1AQ96AJ9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 RNU1-124P-201ENST00000363861 145 ntBASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 RNU6-1051P-201ENST00000365471 102 ntBASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 MIR4662A-201ENST00000637499 67 ntBASIC1.6□□□□□ -2.15
VTI1AQ96AJ9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 RNU6-1296P-201ENST00000383879 107 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 MIR150-201ENST00000385048 84 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 SNORD77.2-201ENST00000391045 68 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 snoU13.17-201ENST00000458802 104 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 AC002350.1-201ENST00000490759 375 ntBASIC1.59□□□□□ -2.15
VTI1AQ96AJ9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms