Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SNORD114-26-201ENST00000363543 72 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-800P-201ENST00000384473 103 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR942-201ENST00000401111 86 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 SNORD100-201ENST00000408573 76 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR2115-201ENST00000516657 100 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 YWHAEP2-201ENST00000580066 112 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 YWHAEP3-201ENST00000582767 121 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR6779-201ENST00000617283 64 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RNU1-36P-201ENST00000365130 165 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-154P-201ENST00000384306 106 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 MIR519A1-201ENST00000385257 85 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RNU2-59P-201ENST00000410482 191 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RNU7-195P-201ENST00000458793 62 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 AL133373.1-201ENST00000497098 94 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RNU11-2P-201ENST00000516898 142 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 RMST_2.1-201ENST00000617263 136 ntBASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SH3RF3Q8TEJ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
SH3RF3Q8TEJ3 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
SH3RF3Q8TEJ3 RNU7-156P-201ENST00000517214 74 ntBASIC1.55□□□□□ -2.16
SH3RF3Q8TEJ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
SH3RF3Q8TEJ3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 RNA5SP264-201ENST00000363115 107 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-471P-201ENST00000383944 106 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-291P-201ENST00000384720 107 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 snoU13.21-201ENST00000459368 105 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 MIR3140-201ENST00000583685 90 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 AC013244.2-201ENST00000603396 103 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.54□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-1260P-201ENST00000362944 107 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-340P-201ENST00000364005 107 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 SNORA24B-201ENST00000384176 131 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 SNORD30.1-201ENST00000391309 70 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 SNORD93-201ENST00000408813 74 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 MIR18B-201ENST00000454574 71 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 MIR4696-201ENST00000581431 70 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 AC005520.4-201ENST00000604337 90 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 TRDV1-202ENST00000621643 102 ntBASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.53□□□□□ -2.16
SH3RF3Q8TEJ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-947P-201ENST00000516264 106 ntBASIC1.52□□□□□ -2.17
SH3RF3Q8TEJ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.52□□□□□ -2.17
SH3RF3Q8TEJ3 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
SH3RF3Q8TEJ3 U6.100-201ENST00000636230 99 ntBASIC1.52□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-403P-201ENST00000363163 104 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-663P-201ENST00000391105 106 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 AC092628.1-201ENST00000436250 252 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SH3RF3Q8TEJ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 MIR103A2-201ENST00000362154 78 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-664P-201ENST00000362381 107 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.606-201ENST00000410579 103 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 RNU7-185P-201ENST00000459215 60 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.809-201ENST00000516058 95 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 MIR6082-201ENST00000613604 109 ntBASIC1.5□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-824P-201ENST00000363724 104 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 SNORA8.1-201ENST00000384250 140 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 MIR9-2-201ENST00000384838 87 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 MIR548H5-201ENST00000580314 60 ntBASIC1.49□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 SNORD116-24-201ENST00000384549 92 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 MIR154-201ENST00000385243 84 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 RNA5SP102-201ENST00000516865 106 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 MIR6515-201ENST00000619843 57 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.48□□□□□ -2.17
SH3RF3Q8TEJ3 SNORD101-201ENST00000384027 73 ntBASIC1.47□□□□□ -2.17
SH3RF3Q8TEJ3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.47□□□□□ -2.17
SH3RF3Q8TEJ3 U6.81-201ENST00000612550 106 ntBASIC1.47□□□□□ -2.17
SH3RF3Q8TEJ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SH3RF3Q8TEJ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SH3RF3Q8TEJ3 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms