Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 RPS29P1-201ENST00000465274 159 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 RNA5SP480-201ENST00000516840 109 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 MIR548H5-201ENST00000580314 60 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 MIR3064-201ENST00000581130 66 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.71□□□□□ -2.14
DDX54Q8TDD1 AC008608.1-201ENST00000603910 127 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 AC022709.1-201ENST00000615967 87 ntBASIC1.71□□□□□ -2.14
DDX54Q8TDD1 SNORA80D-201ENST00000384488 135 ntBASIC1.7□□□□□ -2.14
DDX54Q8TDD1 RNU6-994P-201ENST00000410507 111 ntBASIC1.7□□□□□ -2.14
DDX54Q8TDD1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.7□□□□□ -2.14
DDX54Q8TDD1 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
DDX54Q8TDD1 RNU6-448P-201ENST00000517052 107 ntBASIC1.7□□□□□ -2.14
DDX54Q8TDD1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
DDX54Q8TDD1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
DDX54Q8TDD1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
DDX54Q8TDD1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.69□□□□□ -2.14
DDX54Q8TDD1 RNU6-364P-201ENST00000384387 107 ntBASIC1.69□□□□□ -2.14
DDX54Q8TDD1 RNU6-129P-201ENST00000391022 107 ntBASIC1.69□□□□□ -2.14
DDX54Q8TDD1 AC104996.3-201ENST00000590718 94 ntBASIC1.69□□□□□ -2.14
DDX54Q8TDD1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
DDX54Q8TDD1 RNU7-102P-201ENST00000458948 62 ntBASIC1.68□□□□□ -2.14
DDX54Q8TDD1 TRDV1-202ENST00000621643 102 ntBASIC1.68□□□□□ -2.14
DDX54Q8TDD1 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
DDX54Q8TDD1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
DDX54Q8TDD1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
DDX54Q8TDD1 RNU6-291P-201ENST00000384720 107 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 RNU6-535P-201ENST00000384722 107 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DDX54Q8TDD1 RNU7-90P-201ENST00000459216 62 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 RNU6-1108P-201ENST00000516308 104 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 RNU6-765P-201ENST00000516916 99 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 MIR4804-201ENST00000581683 73 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 SNORD92-201ENST00000585078 85 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 MIR6515-201ENST00000619843 57 ntBASIC1.67□□□□□ -2.14
DDX54Q8TDD1 RNU6-161P-201ENST00000363051 106 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 RNU6-624P-201ENST00000363411 107 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 MIR100-201ENST00000385259 80 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 MIR938-201ENST00000401216 83 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 SNORA70.22-201ENST00000517160 124 ntBASIC1.66□□□□□ -2.14
DDX54Q8TDD1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
DDX54Q8TDD1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.14
DDX54Q8TDD1 RNU6-977P-201ENST00000516411 103 ntBASIC1.65□□□□□ -2.15
DDX54Q8TDD1 U6.100-201ENST00000636230 99 ntBASIC1.65□□□□□ -2.15
DDX54Q8TDD1 SNORA63.2-201ENST00000362603 126 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNU6-776P-201ENST00000364403 104 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNU6-1022P-201ENST00000365049 104 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 MIR599-201ENST00000385069 95 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNU7-10P-201ENST00000607194 63 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 MIR6767-201ENST00000637302 66 ntBASIC1.64□□□□□ -2.15
DDX54Q8TDD1 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
DDX54Q8TDD1 MIR519A1-201ENST00000385257 85 ntBASIC1.63□□□□□ -2.15
DDX54Q8TDD1 RNU7-56P-201ENST00000458744 62 ntBASIC1.63□□□□□ -2.15
DDX54Q8TDD1 AC019288.1-201ENST00000557918 224 ntBASIC1.63□□□□□ -2.15
DDX54Q8TDD1 MIR520F-201ENST00000384824 87 ntBASIC1.62□□□□□ -2.15
DDX54Q8TDD1 MIR222-201ENST00000384992 110 ntBASIC1.62□□□□□ -2.15
DDX54Q8TDD1 MIR548U-201ENST00000390728 81 ntBASIC1.62□□□□□ -2.15
DDX54Q8TDD1 MIR4662A-201ENST00000637499 67 ntBASIC1.62□□□□□ -2.15
DDX54Q8TDD1 AC002429.1-201ENST00000437672 148 ntBASIC1.61□□□□□ -2.15
DDX54Q8TDD1 AC068338.1-201ENST00000565567 176 ntBASIC1.61□□□□□ -2.15
DDX54Q8TDD1 Y_RNA.788-201ENST00000622394 112 ntBASIC1.61□□□□□ -2.15
DDX54Q8TDD1 MIR1-1-201ENST00000362147 71 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 RNU6-315P-201ENST00000362666 107 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 MIR548J-201ENST00000408833 112 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 AC097635.1-201ENST00000450678 155 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.6□□□□□ -2.15
DDX54Q8TDD1 AC138907.6-201ENST00000568401 126 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 AC138869.1-201ENST00000568623 124 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.6□□□□□ -2.15
DDX54Q8TDD1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
DDX54Q8TDD1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
DDX54Q8TDD1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
DDX54Q8TDD1 RNA5SP325-201ENST00000363756 130 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 RNU6-1229P-201ENST00000364295 107 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 RNU6-1296P-201ENST00000383879 107 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 RNU1-119P-201ENST00000391122 165 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 MIR4696-201ENST00000581431 70 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 MIR6788-201ENST00000618842 66 ntBASIC1.59□□□□□ -2.15
DDX54Q8TDD1 MIRLET7A1-201ENST00000362295 80 ntBASIC1.58□□□□□ -2.16
DDX54Q8TDD1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.58□□□□□ -2.16
DDX54Q8TDD1 snoU13.17-201ENST00000458802 104 ntBASIC1.58□□□□□ -2.16
DDX54Q8TDD1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.58□□□□□ -2.16
DDX54Q8TDD1 RNU6-664P-201ENST00000362381 107 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 SNORD101-201ENST00000384027 73 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 SNORA31.14-201ENST00000516728 116 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 MIR4484-201ENST00000582855 83 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 MIR3140-201ENST00000583685 90 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 MIR6779-201ENST00000617283 64 ntBASIC1.57□□□□□ -2.16
DDX54Q8TDD1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
DDX54Q8TDD1 SNORD114-26-201ENST00000363543 72 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 RNU6-686P-201ENST00000364839 107 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 SNORA25-201ENST00000384384 134 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 MIR1827-201ENST00000408549 66 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 SCARNA18B-201ENST00000458806 135 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms