Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RN7SKP12-201ENST00000516275 143 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 RNU6-65P-201ENST00000516332 98 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 MIR4536-1-201ENST00000583537 88 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 RNU6-509P-201ENST00000363519 107 ntBASIC1.01□□□□□ -2.25
HIPK4Q8NE63 SNORD115-24-201ENST00000363528 82 ntBASIC1.01□□□□□ -2.25
HIPK4Q8NE63 RNA5SP403-201ENST00000363598 108 ntBASIC1.01□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.338-201ENST00000365320 114 ntBASIC1.01□□□□□ -2.25
HIPK4Q8NE63 U6.100-201ENST00000636230 99 ntBASIC1.01□□□□□ -2.25
HIPK4Q8NE63 RNA5SP432-201ENST00000362480 116 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.73-201ENST00000362910 113 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 RNY1P1-201ENST00000364372 112 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.388-201ENST00000383919 113 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 RNU6-135P-201ENST00000516769 101 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 RNU7-161P-201ENST00000517289 62 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 MIR3678-201ENST00000578455 94 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 IGLL4P-201ENST00000614590 133 ntBASIC1□□□□□ -2.25
HIPK4Q8NE63 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
HIPK4Q8NE63 MIR18A-201ENST00000362310 71 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 SNORD18A-201ENST00000363753 72 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 RNU6-132P-201ENST00000383863 107 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 RNU6-820P-201ENST00000384273 107 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 SNORA26.2-201ENST00000390922 122 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 MIR4498-201ENST00000577599 66 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 MTRNR2L2-201ENST00000604882 87 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
HIPK4Q8NE63 RNU4-32P-201ENST00000363404 141 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 RNU6-469P-201ENST00000516253 101 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 MIR4639-201ENST00000584938 69 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 MIR548BB-201ENST00000626714 66 ntBASIC0.98□□□□□ -2.25
HIPK4Q8NE63 MIRLET7F1-201ENST00000362202 87 ntBASIC0.97□□□□□ -2.25
HIPK4Q8NE63 AL603825.1-201ENST00000438481 80 ntBASIC0.97□□□□□ -2.25
HIPK4Q8NE63 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.97□□□□□ -2.25
HIPK4Q8NE63 AC022137.1-201ENST00000483735 151 ntBASIC0.97□□□□□ -2.25
HIPK4Q8NE63 TRMT112P2-201ENST00000512910 132 ntBASIC0.97□□□□□ -2.25
HIPK4Q8NE63 MIR3064-201ENST00000581130 66 ntBASIC0.97□□□□□ -2.25
HIPK4Q8NE63 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 RNU6-811P-201ENST00000384069 107 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 RNU6-1152P-201ENST00000384576 107 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 MIR519C-201ENST00000385053 87 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 MIR518E-201ENST00000385252 88 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 RNA5SP292-201ENST00000390974 118 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.96□□□□□ -2.26
HIPK4Q8NE63 MIR4696-201ENST00000581431 70 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 AC104996.3-201ENST00000590718 94 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 AC244669.1-204ENST00000621564 178 ntBASIC0.96□□□□□ -2.26
HIPK4Q8NE63 RNU6-979P-201ENST00000383896 107 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 MIR1236-201ENST00000408340 102 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 Y_RNA.596-201ENST00000410462 109 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 RNU7-104P-201ENST00000459398 79 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.95□□□□□ -2.26
HIPK4Q8NE63 RNU6-1053P-201ENST00000515930 101 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 SNORA72.7-201ENST00000516349 94 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 RNA5SP47-201ENST00000517230 109 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 MIR5588-201ENST00000581890 63 ntBASIC0.95□□□□□ -2.26
HIPK4Q8NE63 RNU6-664P-201ENST00000362381 107 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 RNU4-45P-201ENST00000365469 141 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 SNORD101-201ENST00000384027 73 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 Y_RNA.508-201ENST00000384502 114 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HIPK4Q8NE63 Y_RNA.611-201ENST00000410682 108 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 RNU7-153P-201ENST00000516455 62 ntBASIC0.94□□□□□ -2.26
HIPK4Q8NE63 MIR548U-201ENST00000390728 81 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 RNU6-592P-201ENST00000411333 103 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 MIR3920-201ENST00000581751 86 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 AC006160.2-201ENST00000637708 154 ntBASIC0.93□□□□□ -2.26
HIPK4Q8NE63 MIR337-201ENST00000362281 93 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 RNU6-1229P-201ENST00000364295 107 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 RNU7-13P-201ENST00000516413 62 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 SNORA18.5-201ENST00000516616 101 ntBASIC0.92□□□□□ -2.26
HIPK4Q8NE63 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HIPK4Q8NE63 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
HIPK4Q8NE63 Y_RNA.207-201ENST00000364142 106 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 RNU6-392P-201ENST00000364926 101 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 RNY1P8-201ENST00000383970 114 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 Y_RNA.491-201ENST00000384417 107 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HIPK4Q8NE63 RNU6-321P-201ENST00000410912 106 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 SCARNA16.5-201ENST00000517114 183 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
HIPK4Q8NE63 SNORA36.1-201ENST00000363424 132 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 Y_RNA.239-201ENST00000364444 113 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 RNA5SP173-201ENST00000364857 136 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 SNORD115-44-201ENST00000365391 82 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 AC093729.1-201ENST00000513074 128 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 RNU6-287P-201ENST00000516230 98 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 MIR4796-201ENST00000580742 81 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 MIR548AG2-201ENST00000581228 64 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms