Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 Y_RNA.273-201ENST00000364703 102 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 SNORA19-201ENST00000384737 128 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS52Q8N1B4 RNU7-106P-201ENST00000459514 67 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 AC096720.1-201ENST00000604441 183 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 AC091304.10-201ENST00000641554 121 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 RNU7-195P-201ENST00000458793 62 ntBASIC0.5□□□□□ -2.33
VPS52Q8N1B4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.5□□□□□ -2.33
VPS52Q8N1B4 RNU6-589P-201ENST00000516485 107 ntBASIC0.5□□□□□ -2.33
VPS52Q8N1B4 MIR3613-201ENST00000579844 87 ntBASIC0.5□□□□□ -2.33
VPS52Q8N1B4 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 RNU6-1081P-201ENST00000384537 107 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS52Q8N1B4 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 MIR6129-201ENST00000616087 109 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.49□□□□□ -2.33
VPS52Q8N1B4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.48□□□□□ -2.33
VPS52Q8N1B4 MIR516A2-201ENST00000384888 90 ntBASIC0.48□□□□□ -2.33
VPS52Q8N1B4 MIR516A1-201ENST00000385033 90 ntBASIC0.48□□□□□ -2.33
VPS52Q8N1B4 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
VPS52Q8N1B4 AC141557.1-201ENST00000540982 400 ntBASIC0.48□□□□□ -2.33
VPS52Q8N1B4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.48□□□□□ -2.33
VPS52Q8N1B4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
VPS52Q8N1B4 Y_RNA.629-201ENST00000411368 105 ntBASIC0.47□□□□□ -2.33
VPS52Q8N1B4 MIR4439-201ENST00000583746 80 ntBASIC0.47□□□□□ -2.33
VPS52Q8N1B4 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 SNORD36A-201ENST00000362874 73 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNA5SP227-201ENST00000516184 113 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 AL109933.3-201ENST00000619095 188 ntBASIC0.46□□□□□ -2.34
VPS52Q8N1B4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.45□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.45□□□□□ -2.34
VPS52Q8N1B4 SNORD41.1-201ENST00000391000 69 ntBASIC0.45□□□□□ -2.34
VPS52Q8N1B4 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
VPS52Q8N1B4 RNU6-863P-201ENST00000515989 104 ntBASIC0.45□□□□□ -2.34
VPS52Q8N1B4 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.163-201ENST00000363702 113 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 SNORD45B-201ENST00000364617 72 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.601-201ENST00000410500 113 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 RNU7-104P-201ENST00000459398 79 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.709-201ENST00000516952 92 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
VPS52Q8N1B4 RNU4-36P-201ENST00000364294 144 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 RNU6-524P-201ENST00000384270 107 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 RNU6-106P-201ENST00000384405 107 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 RNU2-59P-201ENST00000410482 191 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 RNU6-904P-201ENST00000516206 101 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 U2.22-201ENST00000636441 106 ntBASIC0.43□□□□□ -2.34
VPS52Q8N1B4 Y_RNA.95-201ENST00000363079 95 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 RNU6-480P-201ENST00000384332 107 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 RNU6-243P-201ENST00000391140 107 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 AC109327.2-201ENST00000448339 378 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
VPS52Q8N1B4 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
VPS52Q8N1B4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
VPS52Q8N1B4 MIR181B2-201ENST00000385004 89 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 MIR1302-5-201ENST00000408164 150 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-554P-201ENST00000410466 106 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-537P-201ENST00000517277 103 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 MIR3920-201ENST00000581751 86 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-86P-201ENST00000606534 107 ntBASIC0.4□□□□□ -2.35
VPS52Q8N1B4 RNU6-1290P-201ENST00000362957 109 ntBASIC0.39□□□□□ -2.35
VPS52Q8N1B4 Y_RNA.291-201ENST00000364886 113 ntBASIC0.39□□□□□ -2.35
VPS52Q8N1B4 SNORA19.1-201ENST00000410656 129 ntBASIC0.39□□□□□ -2.35
VPS52Q8N1B4 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
VPS52Q8N1B4 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
VPS52Q8N1B4 RNU6-1325P-201ENST00000364905 105 ntBASIC0.38□□□□□ -2.35
VPS52Q8N1B4 MIR548L-201ENST00000408303 86 ntBASIC0.38□□□□□ -2.35
VPS52Q8N1B4 MIR548AI-201ENST00000579940 88 ntBASIC0.38□□□□□ -2.35
VPS52Q8N1B4 MIR4777-201ENST00000583710 86 ntBASIC0.38□□□□□ -2.35
VPS52Q8N1B4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 SNORD115-44-201ENST00000365391 82 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 RNU6-813P-201ENST00000384691 107 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 RNY4P18-201ENST00000391107 89 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 SCARNA23-201ENST00000516060 130 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 RNU7-13P-201ENST00000516413 62 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
VPS52Q8N1B4 TRDV1-202ENST00000621643 102 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms