Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.21□□□□□ -2.22
TRIM48Q8IWZ4 AL136317.1-201ENST00000612653 226 ntBASIC1.21□□□□□ -2.22
TRIM48Q8IWZ4 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 MIR519A1-201ENST00000385257 85 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 AC097635.1-201ENST00000450678 155 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 TRDV1-202ENST00000621643 102 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 uc_338.16-201ENST00000621804 95 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 AC006160.2-201ENST00000637708 154 ntBASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM48Q8IWZ4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM48Q8IWZ4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.19□□□□□ -2.22
TRIM48Q8IWZ4 RNU6-132P-201ENST00000383863 107 ntBASIC1.19□□□□□ -2.22
TRIM48Q8IWZ4 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
TRIM48Q8IWZ4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.18□□□□□ -2.22
TRIM48Q8IWZ4 MIR200A-201ENST00000384875 90 ntBASIC1.18□□□□□ -2.22
TRIM48Q8IWZ4 MIR644A-201ENST00000385262 94 ntBASIC1.18□□□□□ -2.22
TRIM48Q8IWZ4 AC002350.1-201ENST00000490759 375 ntBASIC1.18□□□□□ -2.22
TRIM48Q8IWZ4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.17□□□□□ -2.22
TRIM48Q8IWZ4 RNA5SP292-201ENST00000390974 118 ntBASIC1.17□□□□□ -2.22
TRIM48Q8IWZ4 MIR1236-201ENST00000408340 102 ntBASIC1.17□□□□□ -2.22
TRIM48Q8IWZ4 AC093729.1-201ENST00000513074 128 ntBASIC1.17□□□□□ -2.22
TRIM48Q8IWZ4 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
TRIM48Q8IWZ4 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
TRIM48Q8IWZ4 RNA5SP117-201ENST00000365294 118 ntBASIC1.16□□□□□ -2.22
TRIM48Q8IWZ4 RNU6-811P-201ENST00000384069 107 ntBASIC1.16□□□□□ -2.22
TRIM48Q8IWZ4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.16□□□□□ -2.22
TRIM48Q8IWZ4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 SNORD115-37-201ENST00000363768 82 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-787P-201ENST00000384032 107 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 RNU7-171P-201ENST00000459581 62 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 MIR3064-201ENST00000581130 66 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 U6.100-201ENST00000636230 99 ntBASIC1.15□□□□□ -2.23
TRIM48Q8IWZ4 SNORD115-24-201ENST00000363528 82 ntBASIC1.14□□□□□ -2.23
TRIM48Q8IWZ4 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
TRIM48Q8IWZ4 SNORA18.5-201ENST00000516616 101 ntBASIC1.14□□□□□ -2.23
TRIM48Q8IWZ4 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-228P-201ENST00000362700 106 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 SNORA25.9-201ENST00000365087 128 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 SNORD78.1-201ENST00000390866 65 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 AC104996.3-201ENST00000590718 94 ntBASIC1.13□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-652P-201ENST00000365488 107 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 MIR518E-201ENST00000385252 88 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 SNORA25.13-201ENST00000516395 103 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 MIR573-201ENST00000384964 99 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 MIR548U-201ENST00000390728 81 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 MIR1255A-201ENST00000408338 113 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 MIR4796-201ENST00000580742 81 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 MIR4696-201ENST00000581431 70 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-664P-201ENST00000362381 107 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 SNORD101-201ENST00000384027 73 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 SNORD90-201ENST00000391145 111 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 RNA5SP247-201ENST00000411181 105 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 RNU7-161P-201ENST00000517289 62 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 AC140658.3-201ENST00000567603 271 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 MIR4666B-201ENST00000578142 81 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.09□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.09□□□□□ -2.23
TRIM48Q8IWZ4 RNA5SP225-201ENST00000410874 135 ntBASIC1.09□□□□□ -2.23
TRIM48Q8IWZ4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.09□□□□□ -2.23
TRIM48Q8IWZ4 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
TRIM48Q8IWZ4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 MIR499A-201ENST00000384903 122 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 RNU7-104P-201ENST00000459398 79 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 RNU6-469P-201ENST00000516253 101 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 MIR3202-2-201ENST00000635980 79 ntBASIC1.08□□□□□ -2.24
TRIM48Q8IWZ4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM48Q8IWZ4 RNA5SP403-201ENST00000363598 108 ntBASIC1.07□□□□□ -2.24
TRIM48Q8IWZ4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.07□□□□□ -2.24
TRIM48Q8IWZ4 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
TRIM48Q8IWZ4 AL450471.1-201ENST00000447509 127 ntBASIC1.06□□□□□ -2.24
TRIM48Q8IWZ4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.06□□□□□ -2.24
TRIM48Q8IWZ4 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
TRIM48Q8IWZ4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 MIR1287-201ENST00000408492 90 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 MIR1276-201ENST00000408707 83 ntBASIC1.05□□□□□ -2.24
TRIM48Q8IWZ4 RNU6-287P-201ENST00000516230 98 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 254.4 ms