Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AL732372.2-207ENST00000445840 183 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 SEPT14P2-201ENST00000453405 183 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 MTND5P5-201ENST00000503764 376 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 FO082796.1-201ENST00000523795 183 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 MIR3657-201ENST00000584818 117 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 MIR1321-201ENST00000637766 79 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 MIR616-201ENST00000385293 97 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 RNA5SP236-201ENST00000516169 116 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 MIR4536-1-201ENST00000583537 88 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 MIR6509-201ENST00000614603 85 ntBASIC-3.97□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.98□□□□□ -3.05
LINC00643Q86TS7 RNU6-453P-201ENST00000516819 85 ntBASIC-3.98□□□□□ -3.05
LINC00643Q86TS7 UBE2WP1-201ENST00000362030 340 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 SNORD38.1-201ENST00000363863 68 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 RNU6-332P-201ENST00000391193 108 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 MTND3P10-201ENST00000450967 341 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 RNU6-561P-201ENST00000516222 102 ntBASIC-3.99□□□□□ -3.05
LINC00643Q86TS7 RNU6-382P-201ENST00000365181 106 ntBASIC-4□□□□□ -3.05
LINC00643Q86TS7 AL035461.1-201ENST00000421490 332 ntBASIC-4□□□□□ -3.05
LINC00643Q86TS7 MTND2P14-201ENST00000482139 351 ntBASIC-4□□□□□ -3.05
LINC00643Q86TS7 SNORD19B.1-201ENST00000630615 80 ntBASIC-4□□□□□ -3.05
LINC00643Q86TS7 MTND5P26-201ENST00000426018 1752 ntBASIC-4□□□□□ -3.05
LINC00643Q86TS7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-4.01□□□□□ -3.05
LINC00643Q86TS7 RNU6-861P-201ENST00000516745 106 ntBASIC-4.01□□□□□ -3.05
LINC00643Q86TS7 FTX_4.1-201ENST00000616291 147 ntBASIC-4.01□□□□□ -3.05
LINC00643Q86TS7 MIR520D-201ENST00000385002 87 ntBASIC-4.02□□□□□ -3.05
LINC00643Q86TS7 RNU4-43P-201ENST00000410628 137 ntBASIC-4.02□□□□□ -3.05
LINC00643Q86TS7 MIR4723-201ENST00000585070 81 ntBASIC-4.02□□□□□ -3.05
LINC00643Q86TS7 Y_RNA.143-201ENST00000363520 106 ntBASIC-4.03□□□□□ -3.05
LINC00643Q86TS7 RNU6-264P-201ENST00000517134 104 ntBASIC-4.03□□□□□ -3.05
LINC00643Q86TS7 Z69908.1-201ENST00000622603 247 ntBASIC-4.03□□□□□ -3.05
LINC00643Q86TS7 RNU6-1085P-201ENST00000363576 107 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 RNU6-120P-201ENST00000516077 103 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 RNU6-976P-201ENST00000516086 111 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 MIR4528-201ENST00000577763 90 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 AC138305.3-201ENST00000624988 240 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 snoU18.1-201ENST00000629629 71 ntBASIC-4.04□□□□□ -3.06
LINC00643Q86TS7 RNU6-1094P-201ENST00000362416 104 ntBASIC-4.05□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.117-201ENST00000363294 101 ntBASIC-4.05□□□□□ -3.06
LINC00643Q86TS7 RNU6-696P-201ENST00000390834 107 ntBASIC-4.05□□□□□ -3.06
LINC00643Q86TS7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-4.05□□□□□ -3.06
LINC00643Q86TS7 AF246928.1-201ENST00000623768 87 ntBASIC-4.05□□□□□ -3.06
LINC00643Q86TS7 snoU2_19.4-201ENST00000364329 80 ntBASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 HSPE1P25-201ENST00000455484 251 ntBASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.773-201ENST00000607168 90 ntBASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 MIR4773-1-201ENST00000637203 78 ntBASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 AL512310.12-203ENST00000640543 90 ntBASIC-4.06□□□□□ -3.06
LINC00643Q86TS7 RNU6-766P-201ENST00000362478 107 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 RNU6-132P-201ENST00000383863 107 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 RNU6-662P-201ENST00000384253 104 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.463-201ENST00000384271 102 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.569-201ENST00000384749 103 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 MIR548U-201ENST00000390728 81 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 snoU13.10-201ENST00000459301 103 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.701-201ENST00000516812 110 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 MIR548W-201ENST00000581970 74 ntBASIC-4.07□□□□□ -3.06
LINC00643Q86TS7 RNY4P9-201ENST00000363194 97 ntBASIC-4.08□□□□□ -3.06
LINC00643Q86TS7 RNU6-1214P-201ENST00000363650 109 ntBASIC-4.08□□□□□ -3.06
LINC00643Q86TS7 RNU6-1267P-201ENST00000410747 107 ntBASIC-4.08□□□□□ -3.06
LINC00643Q86TS7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-4.08□□□□□ -3.06
LINC00643Q86TS7 RNU6-1313P-201ENST00000362622 102 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.236-201ENST00000364427 111 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 SNORD115-31-201ENST00000365318 82 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 RNU6-1051P-201ENST00000365471 102 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 MTATP6P21-201ENST00000440681 189 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 RNU6-1129P-201ENST00000515964 104 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.682-201ENST00000516457 100 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 AL365265.1-201ENST00000621045 234 ntBASIC-4.09□□□□□ -3.06
LINC00643Q86TS7 Y_RNA.217-201ENST00000364214 105 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 RNU6-1109P-201ENST00000391187 107 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 AC096644.2-201ENST00000429278 159 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.641-201ENST00000459414 105 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 RNU7-6P-201ENST00000516845 62 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.713-201ENST00000517013 96 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 VN1R91P-201ENST00000594377 169 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 AC107308.1-201ENST00000615897 301 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 AL359880.1-201ENST00000621879 266 ntBASIC-4.1□□□□□ -3.07
LINC00643Q86TS7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.64-201ENST00000362845 102 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 RNU6-1090P-201ENST00000364065 94 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.314-201ENST00000365114 102 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 AL445567.1-201ENST00000439121 144 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.639-201ENST00000458981 102 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 NBR2-204ENST00000587322 63 ntBASIC-4.11□□□□□ -3.07
LINC00643Q86TS7 SNORA7.5-201ENST00000410672 110 ntBASIC-4.12□□□□□ -3.07
LINC00643Q86TS7 AL691482.2-201ENST00000457453 84 ntBASIC-4.12□□□□□ -3.07
LINC00643Q86TS7 MIR6739-201ENST00000622461 75 ntBASIC-4.12□□□□□ -3.07
LINC00643Q86TS7 RNU6-458P-201ENST00000384179 107 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.693-201ENST00000516641 110 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 AL162413.1-201ENST00000603198 110 ntBASIC-4.13□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms