Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-165P-201ENST00000517170 99 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 SNORD113.3-201ENST00000364630 78 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 HMGN2P19-201ENST00000425149 265 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.66□□□□□ -2.14
ATG4DQ86TL0 RNU6-274P-201ENST00000459566 107 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 RNU6-982P-201ENST00000516216 102 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 RNU6-548P-201ENST00000517083 115 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 AC036111.3-201ENST00000526389 112 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 MIR3664-201ENST00000579074 99 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 AC103706.3-201ENST00000636297 85 ntBASIC1.66□□□□□ -2.14
ATG4DQ86TL0 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 AC244098.3-201ENST00000424803 96 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 AL078603.1-201ENST00000603824 313 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.65□□□□□ -2.15
ATG4DQ86TL0 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 SNORD1A-201ENST00000364968 72 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 SNORA40.6-201ENST00000391153 128 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 SNORA26.9-201ENST00000391322 122 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 AC110620.1-201ENST00000416042 228 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 AC023827.1-201ENST00000569247 97 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 MIR4287-201ENST00000579398 78 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 AL353997.5-201ENST00000618886 171 ntBASIC1.64□□□□□ -2.15
ATG4DQ86TL0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ATG4DQ86TL0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ATG4DQ86TL0 RNU1-17P-201ENST00000363022 152 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 AC048334.1-201ENST00000477975 159 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 RNU7-40P-201ENST00000516397 64 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 MIR4676-201ENST00000583078 72 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 AC008608.1-201ENST00000603910 127 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
ATG4DQ86TL0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 RNU6-364P-201ENST00000384387 107 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 SNORA75.2-201ENST00000391138 150 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 SNORA75.3-201ENST00000391231 150 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 RPS26P5-201ENST00000418544 335 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 AL691482.2-201ENST00000457453 84 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 MIR3937-201ENST00000580135 106 ntBASIC1.62□□□□□ -2.15
ATG4DQ86TL0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
ATG4DQ86TL0 RNU6-482P-201ENST00000391068 107 ntBASIC1.61□□□□□ -2.15
ATG4DQ86TL0 U3.27-201ENST00000391237 200 ntBASIC1.61□□□□□ -2.15
ATG4DQ86TL0 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 MIR203A-201ENST00000384836 110 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 MIR676-201ENST00000390702 67 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 RNU6-141P-201ENST00000410499 105 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AL603825.1-201ENST00000438481 80 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AC244505.6-201ENST00000452829 130 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 RNU7-102P-201ENST00000458948 62 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 RNU6-752P-201ENST00000516376 102 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 NAMPTP3-201ENST00000569273 224 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AC103810.8-201ENST00000607347 118 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AC069503.3-201ENST00000618674 145 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 AC027335.2-201ENST00000624030 375 ntBASIC1.6□□□□□ -2.15
ATG4DQ86TL0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATG4DQ86TL0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 RNU6-614P-201ENST00000384369 107 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 AC079150.2-201ENST00000443733 78 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 MIR548AG2-201ENST00000581228 64 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 U6.59-201ENST00000615686 107 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
ATG4DQ86TL0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
ATG4DQ86TL0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ATG4DQ86TL0 MIR938-201ENST00000401216 83 ntBASIC1.58□□□□□ -2.16
ATG4DQ86TL0 SNORD13-201ENST00000459299 104 ntBASIC1.58□□□□□ -2.16
ATG4DQ86TL0 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
ATG4DQ86TL0 AC106800.4-201ENST00000614905 153 ntBASIC1.58□□□□□ -2.16
ATG4DQ86TL0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
ATG4DQ86TL0 RNU6-369P-201ENST00000362515 102 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 SNORD115-44-201ENST00000365391 82 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ATG4DQ86TL0 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 SNORD111-201ENST00000408139 94 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.57□□□□□ -2.16
ATG4DQ86TL0 RNU7-13P-201ENST00000516413 62 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 AL157834.3-201ENST00000615543 103 ntBASIC1.57□□□□□ -2.16
ATG4DQ86TL0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
ATG4DQ86TL0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
ATG4DQ86TL0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ATG4DQ86TL0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.56□□□□□ -2.16
ATG4DQ86TL0 RNU6-1039P-201ENST00000383931 107 ntBASIC1.56□□□□□ -2.16
ATG4DQ86TL0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ATG4DQ86TL0 SNORD75.2-201ENST00000408784 58 ntBASIC1.56□□□□□ -2.16
ATG4DQ86TL0 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
ATG4DQ86TL0 MIR6509-201ENST00000614603 85 ntBASIC1.56□□□□□ -2.16
ATG4DQ86TL0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
ATG4DQ86TL0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms