Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNA5SP170-201ENST00000517150 101 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 AL513043.2-201ENST00000573941 143 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 AC025521.1-201ENST00000621624 286 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 SNORD114-26-201ENST00000363543 72 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 RNA5SP245-201ENST00000364239 121 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 SNORA31.14-201ENST00000516728 116 ntBASIC0.97□□□□□ -2.25
UBE3BQ7Z3V4 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
UBE3BQ7Z3V4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.96□□□□□ -2.26
UBE3BQ7Z3V4 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 AC244098.3-201ENST00000424803 96 ntBASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 RNU7-195P-201ENST00000458793 62 ntBASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 AL353765.1-201ENST00000605514 183 ntBASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.95□□□□□ -2.26
UBE3BQ7Z3V4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.220-201ENST00000364244 109 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 RNA5SP117-201ENST00000365294 118 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.369-201ENST00000365568 117 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-243P-201ENST00000391140 107 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 RNY4P30-201ENST00000410216 95 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-162P-201ENST00000516228 103 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 MIR3612-201ENST00000579753 87 ntBASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-1131P-201ENST00000364955 107 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-49P-201ENST00000384256 107 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.648-201ENST00000459455 110 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-135P-201ENST00000516769 101 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 MIR5582-201ENST00000579697 68 ntBASIC0.93□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.43-201ENST00000362670 111 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 Y_RNA.190-201ENST00000363964 101 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 MIR599-201ENST00000385069 95 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 MIR6779-201ENST00000617283 64 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 MIR6835-201ENST00000621552 64 ntBASIC0.92□□□□□ -2.26
UBE3BQ7Z3V4 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
UBE3BQ7Z3V4 RNY1P7-201ENST00000384743 110 ntBASIC0.91□□□□□ -2.26
UBE3BQ7Z3V4 RNU6-844P-201ENST00000517175 102 ntBASIC0.91□□□□□ -2.26
UBE3BQ7Z3V4 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
UBE3BQ7Z3V4 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
UBE3BQ7Z3V4 MIR508-201ENST00000384857 115 ntBASIC0.9□□□□□ -2.27
UBE3BQ7Z3V4 MIR18A-201ENST00000362310 71 ntBASIC0.89□□□□□ -2.27
UBE3BQ7Z3V4 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
UBE3BQ7Z3V4 snoU13.11-201ENST00000459219 104 ntBASIC0.89□□□□□ -2.27
UBE3BQ7Z3V4 MIR644A-201ENST00000385262 94 ntBASIC0.88□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.88□□□□□ -2.27
UBE3BQ7Z3V4 MIR4639-201ENST00000584938 69 ntBASIC0.88□□□□□ -2.27
UBE3BQ7Z3V4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-1255P-201ENST00000363434 112 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 RNA5SP403-201ENST00000363598 108 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 SNORD18A-201ENST00000363753 72 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 Y_RNA.283-201ENST00000364798 112 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-524P-201ENST00000384270 107 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 RNU7-85P-201ENST00000458851 63 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-469P-201ENST00000516253 101 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 AC026421.1-201ENST00000519101 163 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 MIR3678-201ENST00000578455 94 ntBASIC0.87□□□□□ -2.27
UBE3BQ7Z3V4 SNORD115-24-201ENST00000363528 82 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 SNORD28-201ENST00000384706 75 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-466P-201ENST00000391224 103 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 AL161932.1-201ENST00000437408 146 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 SNORD4B-201ENST00000459083 72 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-75P-201ENST00000515944 104 ntBASIC0.86□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-957P-201ENST00000363652 99 ntBASIC0.85□□□□□ -2.27
UBE3BQ7Z3V4 RNA5SP325-201ENST00000363756 130 ntBASIC0.85□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-519P-201ENST00000410590 108 ntBASIC0.85□□□□□ -2.27
UBE3BQ7Z3V4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.85□□□□□ -2.27
UBE3BQ7Z3V4 TRDV1-202ENST00000621643 102 ntBASIC0.85□□□□□ -2.27
UBE3BQ7Z3V4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 RNU6-294P-201ENST00000364999 102 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 AL606490.4-201ENST00000423117 127 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 RNA5SP47-201ENST00000517230 109 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 RNU7-161P-201ENST00000517289 62 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.84□□□□□ -2.27
UBE3BQ7Z3V4 SNORD116-22-201ENST00000384430 92 ntBASIC0.83□□□□□ -2.28
UBE3BQ7Z3V4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.83□□□□□ -2.28
UBE3BQ7Z3V4 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
UBE3BQ7Z3V4 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
UBE3BQ7Z3V4 AC244669.1-204ENST00000621564 178 ntBASIC0.83□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 MIR4536-1-201ENST00000583537 88 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 MIR6828-201ENST00000636181 60 ntBASIC0.82□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms