Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 Y_RNA.678-201ENST00000516408 96 ntBASIC-2□□□□□ -2.73
USP54Q70EL1 RNU6-412P-201ENST00000516434 106 ntBASIC-2□□□□□ -2.73
USP54Q70EL1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2□□□□□ -2.73
USP54Q70EL1 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 SNORA63.7-201ENST00000365579 123 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 MIR34C-201ENST00000384831 77 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 MIR6888-201ENST00000621977 67 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 AC090574.1-201ENST00000623186 233 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 U6.96-201ENST00000636425 70 ntBASIC-2.01□□□□□ -2.73
USP54Q70EL1 RNU6-103P-201ENST00000363686 107 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNU6-978P-201ENST00000364371 103 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNA5SP86-201ENST00000390869 98 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNU6-559P-201ENST00000516151 98 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNU6-495P-201ENST00000362995 107 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 AC068339.1-201ENST00000526965 141 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.02□□□□□ -2.73
USP54Q70EL1 RNU6-935P-201ENST00000410371 100 ntBASIC-2.03□□□□□ -2.73
USP54Q70EL1 RNU2-16P-201ENST00000410712 136 ntBASIC-2.03□□□□□ -2.73
USP54Q70EL1 MTATP6P19-201ENST00000413797 659 ntBASIC-2.03□□□□□ -2.73
USP54Q70EL1 RNY4-201ENST00000516507 96 ntBASIC-2.03□□□□□ -2.73
USP54Q70EL1 AL512310.12-203ENST00000640543 90 ntBASIC-2.03□□□□□ -2.73
USP54Q70EL1 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 RNU1-115P-201ENST00000365329 160 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 MIR451A-201ENST00000385059 72 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 CYP3A54P-201ENST00000566950 75 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 AC104985.2-201ENST00000620598 500 ntBASIC-2.04□□□□□ -2.74
USP54Q70EL1 MTND4P17-201ENST00000470444 350 ntBASIC-2.05□□□□□ -2.74
USP54Q70EL1 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 RNU6-647P-201ENST00000364243 107 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 SNORA63.6-201ENST00000364921 119 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 RNU6-381P-201ENST00000391259 108 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 MIR4464-201ENST00000580818 92 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 AC021753.1-201ENST00000635724 168 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 MIR4536-1-201ENST00000583537 88 ntBASIC-2.06□□□□□ -2.74
USP54Q70EL1 RNU6-164P-201ENST00000364604 103 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 RNU6-980P-201ENST00000516925 103 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 MIR4490-201ENST00000582647 84 ntBASIC-2.07□□□□□ -2.74
USP54Q70EL1 AL078595.1-201ENST00000404458 226 ntBASIC-2.08□□□□□ -2.74
USP54Q70EL1 RNU2-51P-201ENST00000410708 197 ntBASIC-2.08□□□□□ -2.74
USP54Q70EL1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.08□□□□□ -2.74
USP54Q70EL1 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 RNU6-746P-201ENST00000384112 109 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 RNU6-578P-201ENST00000390980 103 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 RNU6-118P-201ENST00000516552 102 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 U4.5-201ENST00000617137 123 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 MIR3688-2-201ENST00000636963 87 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 SNORD18B-201ENST00000365659 72 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 FGF7P4-201ENST00000509595 295 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.09□□□□□ -2.74
USP54Q70EL1 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.1□□□□□ -2.75
USP54Q70EL1 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.1□□□□□ -2.75
USP54Q70EL1 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.1□□□□□ -2.75
USP54Q70EL1 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.1□□□□□ -2.75
USP54Q70EL1 MIR6874-201ENST00000635894 71 ntBASIC-2.1□□□□□ -2.75
USP54Q70EL1 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 MIR1302-11-201ENST00000408051 138 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 MIR1302-9-201ENST00000408365 138 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 MIR1302-10-201ENST00000408734 138 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 RNU7-24P-201ENST00000458867 62 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 MIR1302-2-201ENST00000607096 138 ntBASIC-2.11□□□□□ -2.75
USP54Q70EL1 MIR548G-201ENST00000408442 89 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 RNU6-121P-201ENST00000410525 99 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 AC138393.2-201ENST00000414742 246 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 AC108081.1-201ENST00000604358 221 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 AL365265.1-201ENST00000621045 234 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 AC090617.8-201ENST00000623339 167 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 RNU6-770P-201ENST00000363929 105 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 RNU4-24P-201ENST00000364565 139 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 SNORD116-29-201ENST00000384516 83 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 MIR1255B2-201ENST00000408618 67 ntBASIC-2.12□□□□□ -2.75
USP54Q70EL1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.12□□□□□ -2.75
USP54Q70EL1 MTND3P22-201ENST00000510932 243 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 218.7 ms