Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RN7SKP12-201ENST00000516275 143 ntBASIC0.56□□□□□ -2.32
CCDC144NLQ6NUI1 SNORA25.18-201ENST00000607153 114 ntBASIC0.56□□□□□ -2.32
CCDC144NLQ6NUI1 MIR6515-201ENST00000619843 57 ntBASIC0.56□□□□□ -2.32
CCDC144NLQ6NUI1 SNORA51.5-201ENST00000384126 131 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 SNORD71-201ENST00000411292 86 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 SCARNA23-201ENST00000516060 130 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 RNU6-919P-201ENST00000516731 104 ntBASIC0.55□□□□□ -2.32
CCDC144NLQ6NUI1 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 RNU6-756P-201ENST00000383997 107 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 MIR181B2-201ENST00000385004 89 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 MIR590-201ENST00000385008 97 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.54□□□□□ -2.32
CCDC144NLQ6NUI1 RNA5SP436-201ENST00000516020 115 ntBASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 RNU6-795P-201ENST00000516323 103 ntBASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 AC012531.4-201ENST00000616509 177 ntBASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC144NLQ6NUI1 RNU6-716P-201ENST00000365621 103 ntBASIC0.52□□□□□ -2.33
CCDC144NLQ6NUI1 Y_RNA.467-201ENST00000384297 102 ntBASIC0.52□□□□□ -2.33
CCDC144NLQ6NUI1 MIR548L-201ENST00000408303 86 ntBASIC0.52□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-537P-201ENST00000517277 103 ntBASIC0.52□□□□□ -2.33
CCDC144NLQ6NUI1 MIR4777-201ENST00000583710 86 ntBASIC0.52□□□□□ -2.33
CCDC144NLQ6NUI1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-766P-201ENST00000362478 107 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-755P-201ENST00000364400 103 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-726P-201ENST00000364680 107 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-813P-201ENST00000384691 107 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 AL031737.1-201ENST00000450125 223 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 MIR548Z-201ENST00000584743 97 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
CCDC144NLQ6NUI1 AL035461.1-201ENST00000421490 332 ntBASIC0.5□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-1265P-201ENST00000516342 103 ntBASIC0.5□□□□□ -2.33
CCDC144NLQ6NUI1 Y_RNA.818-201ENST00000618813 71 ntBASIC0.5□□□□□ -2.33
CCDC144NLQ6NUI1 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
CCDC144NLQ6NUI1 MIR598-201ENST00000384868 97 ntBASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 AC103810.7-201ENST00000607821 91 ntBASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 AC025521.1-201ENST00000621624 286 ntBASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
CCDC144NLQ6NUI1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 MIR450A1-201ENST00000362262 91 ntBASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-109P-201ENST00000516364 107 ntBASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 RNU7-13P-201ENST00000516413 62 ntBASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 RNU6-184P-201ENST00000516514 107 ntBASIC0.48□□□□□ -2.33
CCDC144NLQ6NUI1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 SNORA63.4-201ENST00000362763 126 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 AL513043.2-201ENST00000573941 143 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 TRDV1-202ENST00000621643 102 ntBASIC0.47□□□□□ -2.33
CCDC144NLQ6NUI1 Y_RNA.93-201ENST00000363066 109 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.96-201ENST00000363092 109 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.107-201ENST00000363190 121 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 SNORD44.1-201ENST00000363202 61 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-957P-201ENST00000363652 99 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-44P-201ENST00000384045 107 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.544-201ENST00000384650 113 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-466P-201ENST00000391224 103 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 AL161932.1-201ENST00000437408 146 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 AC069271.1-201ENST00000445577 156 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.705-201ENST00000516862 110 ntBASIC0.46□□□□□ -2.34
CCDC144NLQ6NUI1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-644P-201ENST00000391155 98 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 snoU13.11-201ENST00000459219 104 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.648-201ENST00000459455 110 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 MIR6513-201ENST00000621188 64 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 AL162376.1-201ENST00000624117 175 ntBASIC0.45□□□□□ -2.34
CCDC144NLQ6NUI1 SNORD115-44-201ENST00000365391 82 ntBASIC0.44□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-972P-201ENST00000391208 107 ntBASIC0.44□□□□□ -2.34
CCDC144NLQ6NUI1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.44□□□□□ -2.34
CCDC144NLQ6NUI1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.44□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.283-201ENST00000364798 112 ntBASIC0.43□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-887P-201ENST00000410660 100 ntBASIC0.43□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-863P-201ENST00000515989 104 ntBASIC0.43□□□□□ -2.34
CCDC144NLQ6NUI1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.43□□□□□ -2.34
CCDC144NLQ6NUI1 U6.100-201ENST00000636230 99 ntBASIC0.43□□□□□ -2.34
CCDC144NLQ6NUI1 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
CCDC144NLQ6NUI1 Y_RNA.596-201ENST00000410462 109 ntBASIC0.42□□□□□ -2.34
CCDC144NLQ6NUI1 RNU7-61P-201ENST00000515897 61 ntBASIC0.42□□□□□ -2.34
CCDC144NLQ6NUI1 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CCDC144NLQ6NUI1 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
CCDC144NLQ6NUI1 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms