Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC025521.1-201ENST00000621624 286 ntBASIC0.54□□□□□ -2.32
SNAI3Q3KNW1 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
SNAI3Q3KNW1 SNORD28-201ENST00000384706 75 ntBASIC0.53□□□□□ -2.32
SNAI3Q3KNW1 MTATP6P29-201ENST00000415057 132 ntBASIC0.53□□□□□ -2.32
SNAI3Q3KNW1 SNORD115-24-201ENST00000363528 82 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 RNA5SP403-201ENST00000363598 108 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 RNU6-469P-201ENST00000516253 101 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 RNA5SP47-201ENST00000517230 109 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 MIR4639-201ENST00000584938 69 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 U7.3-201ENST00000616123 62 ntBASIC0.52□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 RNU6-524P-201ENST00000384270 107 ntBASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.51□□□□□ -2.33
SNAI3Q3KNW1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 SNORD116-10-201ENST00000363791 102 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.290-201ENST00000364879 114 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 MIR488-201ENST00000365739 83 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNY1P8-201ENST00000383970 114 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 snoU13.11-201ENST00000459219 104 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.648-201ENST00000459455 110 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNU6-162P-201ENST00000516228 103 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNU6-1265P-201ENST00000516342 103 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 RNU7-161P-201ENST00000517289 62 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 AC244669.1-204ENST00000621564 178 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 MIR6828-201ENST00000636181 60 ntBASIC0.5□□□□□ -2.33
SNAI3Q3KNW1 SNORA36.1-201ENST00000363424 132 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.190-201ENST00000363964 101 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 SNORA25.9-201ENST00000365087 128 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 MIR4452-201ENST00000583004 71 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 MALAT1.1-201ENST00000618249 95 ntBASIC0.49□□□□□ -2.33
SNAI3Q3KNW1 RNU6-957P-201ENST00000363652 99 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.283-201ENST00000364798 112 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 AL161932.1-201ENST00000437408 146 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 Y_RNA.694-201ENST00000516677 117 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 TRDV1-202ENST00000621643 102 ntBASIC0.48□□□□□ -2.33
SNAI3Q3KNW1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 MIR548J-201ENST00000408833 112 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 RNU7-85P-201ENST00000458851 63 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 RNU6-75P-201ENST00000515944 104 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 MTRNR2L2-201ENST00000604882 87 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 MIR6788-201ENST00000618842 66 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
SNAI3Q3KNW1 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 SNORD41.1-201ENST00000391000 69 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 RNU6-466P-201ENST00000391224 103 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 SNORD4B-201ENST00000459083 72 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 AC067863.3-201ENST00000624172 122 ntBASIC0.46□□□□□ -2.34
SNAI3Q3KNW1 RNU6-1298P-201ENST00000362456 101 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 RNU7-104P-201ENST00000459398 79 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 RNA5SP268-201ENST00000516828 124 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 MIR3920-201ENST00000581751 86 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 MIR4536-1-201ENST00000583537 88 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
SNAI3Q3KNW1 Y_RNA.220-201ENST00000364244 109 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 SNORD115-44-201ENST00000365391 82 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 RNY1P7-201ENST00000384743 110 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 Y_RNA.596-201ENST00000410462 109 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 RNU6-519P-201ENST00000410590 108 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 AC026421.1-201ENST00000519101 163 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 MIR151B-201ENST00000584249 96 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 U6.100-201ENST00000636230 99 ntBASIC0.44□□□□□ -2.34
SNAI3Q3KNW1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU6-1131P-201ENST00000364955 107 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU6-49P-201ENST00000384256 107 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNY4P30-201ENST00000410216 95 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 Y_RNA.609-201ENST00000410669 89 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU6-65P-201ENST00000516332 98 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU7-13P-201ENST00000516413 62 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU6-844P-201ENST00000517175 102 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 MIR4696-201ENST00000581431 70 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 MIR7107-201ENST00000611489 80 ntBASIC0.43□□□□□ -2.34
SNAI3Q3KNW1 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
SNAI3Q3KNW1 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms