Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 Y_RNA.221-201ENST00000364248 96 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 Y_RNA.290-201ENST00000364879 114 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 MTATP6P29-201ENST00000415057 132 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 Y_RNA.705-201ENST00000516862 110 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 MIR4439-201ENST00000583746 80 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
ATP2B3Q16720 SNORD36A-201ENST00000362874 73 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 RNY1P7-201ENST00000384743 110 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 RNU6-887P-201ENST00000410660 100 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 snoU13.11-201ENST00000459219 104 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 Y_RNA.809-201ENST00000516058 95 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 AC138907.6-201ENST00000568401 126 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 AC138869.1-201ENST00000568623 124 ntBASIC0.89□□□□□ -2.27
ATP2B3Q16720 Y_RNA.190-201ENST00000363964 101 ntBASIC0.88□□□□□ -2.27
ATP2B3Q16720 SNORA36.2-201ENST00000384004 127 ntBASIC0.88□□□□□ -2.27
ATP2B3Q16720 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
ATP2B3Q16720 RNU6-1125P-201ENST00000363601 107 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 Y_RNA.174-201ENST00000363781 105 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 RNU6-524P-201ENST00000384270 107 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 RNU6-480P-201ENST00000384332 107 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 RNU6-1254P-201ENST00000391266 104 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 RNY4P30-201ENST00000410216 95 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 AC097635.1-201ENST00000450678 155 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 RNU7-10P-201ENST00000607194 63 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 MALAT1.1-201ENST00000618249 95 ntBASIC0.87□□□□□ -2.27
ATP2B3Q16720 SNORD115-24-201ENST00000363528 82 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNU6-957P-201ENST00000363652 99 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 SNORD18A-201ENST00000363753 72 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNU6-1131P-201ENST00000364955 107 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 SNORD58A-201ENST00000383875 65 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNU6-243P-201ENST00000391140 107 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 AC244505.6-201ENST00000452829 130 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNU6-158P-201ENST00000517104 100 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
ATP2B3Q16720 RNU6-49P-201ENST00000384256 107 ntBASIC0.85□□□□□ -2.27
ATP2B3Q16720 RNU6-469P-201ENST00000516253 101 ntBASIC0.85□□□□□ -2.27
ATP2B3Q16720 RNU7-161P-201ENST00000517289 62 ntBASIC0.85□□□□□ -2.27
ATP2B3Q16720 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
ATP2B3Q16720 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
ATP2B3Q16720 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
ATP2B3Q16720 RNU6-1298P-201ENST00000362456 101 ntBASIC0.84□□□□□ -2.27
ATP2B3Q16720 RNU6-1260P-201ENST00000362944 107 ntBASIC0.84□□□□□ -2.27
ATP2B3Q16720 RNU6-972P-201ENST00000391208 107 ntBASIC0.84□□□□□ -2.27
ATP2B3Q16720 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.84□□□□□ -2.27
ATP2B3Q16720 MIR519A1-201ENST00000385257 85 ntBASIC0.83□□□□□ -2.28
ATP2B3Q16720 RNU7-85P-201ENST00000458851 63 ntBASIC0.83□□□□□ -2.28
ATP2B3Q16720 RNU7-104P-201ENST00000459398 79 ntBASIC0.83□□□□□ -2.28
ATP2B3Q16720 AC244669.1-204ENST00000621564 178 ntBASIC0.83□□□□□ -2.28
ATP2B3Q16720 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
ATP2B3Q16720 SNORD28-201ENST00000384706 75 ntBASIC0.82□□□□□ -2.28
ATP2B3Q16720 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
ATP2B3Q16720 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.82□□□□□ -2.28
ATP2B3Q16720 RNA5SP94-201ENST00000516917 108 ntBASIC0.81□□□□□ -2.28
ATP2B3Q16720 TRDV1-202ENST00000621643 102 ntBASIC0.81□□□□□ -2.28
ATP2B3Q16720 MIR2052-201ENST00000636055 55 ntBASIC0.81□□□□□ -2.28
ATP2B3Q16720 U6.100-201ENST00000636230 99 ntBASIC0.81□□□□□ -2.28
ATP2B3Q16720 Y_RNA.283-201ENST00000364798 112 ntBASIC0.8□□□□□ -2.28
ATP2B3Q16720 AC026421.1-201ENST00000519101 163 ntBASIC0.8□□□□□ -2.28
ATP2B3Q16720 RNA5SP403-201ENST00000363598 108 ntBASIC0.79□□□□□ -2.28
ATP2B3Q16720 MIR140-201ENST00000385282 100 ntBASIC0.79□□□□□ -2.28
ATP2B3Q16720 Y_RNA.609-201ENST00000410669 89 ntBASIC0.79□□□□□ -2.28
ATP2B3Q16720 RNA5SP47-201ENST00000517230 109 ntBASIC0.79□□□□□ -2.28
ATP2B3Q16720 SNORD116-10-201ENST00000363791 102 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 Y_RNA.648-201ENST00000459455 110 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 RNU6-75P-201ENST00000515944 104 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 RNU6-1265P-201ENST00000516342 103 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
ATP2B3Q16720 MIR5582-201ENST00000579697 68 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 MIR4639-201ENST00000584938 69 ntBASIC0.78□□□□□ -2.28
ATP2B3Q16720 Y_RNA.96-201ENST00000363092 109 ntBASIC0.77□□□□□ -2.29
ATP2B3Q16720 RNA5SP517-201ENST00000364724 117 ntBASIC0.77□□□□□ -2.29
ATP2B3Q16720 RNU6-466P-201ENST00000391224 103 ntBASIC0.77□□□□□ -2.29
ATP2B3Q16720 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
ATP2B3Q16720 RNU6-519P-201ENST00000410590 108 ntBASIC0.76□□□□□ -2.29
ATP2B3Q16720 RNA5SP170-201ENST00000517150 101 ntBASIC0.76□□□□□ -2.29
ATP2B3Q16720 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
ATP2B3Q16720 MIRLET7F1-201ENST00000362202 87 ntBASIC0.75□□□□□ -2.29
ATP2B3Q16720 Y_RNA.220-201ENST00000364244 109 ntBASIC0.75□□□□□ -2.29
ATP2B3Q16720 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
ATP2B3Q16720 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
ATP2B3Q16720 SNORD4B-201ENST00000459083 72 ntBASIC0.75□□□□□ -2.29
ATP2B3Q16720 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
ATP2B3Q16720 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
ATP2B3Q16720 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
ATP2B3Q16720 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.74□□□□□ -2.29
ATP2B3Q16720 RNU6-132P-201ENST00000383863 107 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 SNORA8.2-201ENST00000384372 139 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 RNY1P4-201ENST00000384595 115 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 RNU4-54P-201ENST00000516428 129 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 RNU6-135P-201ENST00000516769 101 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 RNA5SP268-201ENST00000516828 124 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 271.6 ms