Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.71□□□□□ -2.3
CFHR3Q02985 AL161932.1-201ENST00000437408 146 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 snoU13.11-201ENST00000459219 104 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 MIR4452-201ENST00000583004 71 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 MIR4639-201ENST00000584938 69 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 AC244669.1-204ENST00000621564 178 ntBASIC0.71□□□□□ -2.3
CFHR3Q02985 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
CFHR3Q02985 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
CFHR3Q02985 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
CFHR3Q02985 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CFHR3Q02985 Y_RNA.190-201ENST00000363964 101 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 Y_RNA.290-201ENST00000364879 114 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 MIR140-201ENST00000385282 100 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 RNU7-161P-201ENST00000517289 62 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.69□□□□□ -2.3
CFHR3Q02985 RNU6-957P-201ENST00000363652 99 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 SNORD116-10-201ENST00000363791 102 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 RNU6-466P-201ENST00000391224 103 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 RNU7-104P-201ENST00000459398 79 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 Y_RNA.648-201ENST00000459455 110 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 RNA5SP47-201ENST00000517230 109 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 MALAT1.1-201ENST00000618249 95 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 TRDV1-202ENST00000621643 102 ntBASIC0.68□□□□□ -2.3
CFHR3Q02985 RNA5SP403-201ENST00000363598 108 ntBASIC0.67□□□□□ -2.3
CFHR3Q02985 MIR488-201ENST00000365739 83 ntBASIC0.67□□□□□ -2.3
CFHR3Q02985 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
CFHR3Q02985 RNY4P30-201ENST00000410216 95 ntBASIC0.67□□□□□ -2.3
CFHR3Q02985 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.67□□□□□ -2.3
CFHR3Q02985 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.67□□□□□ -2.3
CFHR3Q02985 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
CFHR3Q02985 Y_RNA.283-201ENST00000364798 112 ntBASIC0.66□□□□□ -2.3
CFHR3Q02985 SCARNA16.5-201ENST00000517114 183 ntBASIC0.66□□□□□ -2.3
CFHR3Q02985 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
CFHR3Q02985 MIR548L-201ENST00000408303 86 ntBASIC0.65□□□□□ -2.31
CFHR3Q02985 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
CFHR3Q02985 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNU6-519P-201ENST00000410590 108 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNU7-85P-201ENST00000458851 63 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNA5SP227-201ENST00000516184 113 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNU6-65P-201ENST00000516332 98 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 RNA5SP268-201ENST00000516828 124 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 MIR4536-1-201ENST00000583537 88 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 AC092634.7-201ENST00000621022 103 ntBASIC0.64□□□□□ -2.31
CFHR3Q02985 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 Y_RNA.220-201ENST00000364244 109 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 RNU6-1131P-201ENST00000364955 107 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 RNY1P7-201ENST00000384743 110 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 Y_RNA.609-201ENST00000410669 89 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 RNU6-1265P-201ENST00000516342 103 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 RNU7-13P-201ENST00000516413 62 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 AC026421.1-201ENST00000519101 163 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
CFHR3Q02985 SNORD4B-201ENST00000459083 72 ntBASIC0.62□□□□□ -2.31
CFHR3Q02985 Y_RNA.694-201ENST00000516677 117 ntBASIC0.62□□□□□ -2.31
CFHR3Q02985 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
CFHR3Q02985 MIR6788-201ENST00000618842 66 ntBASIC0.62□□□□□ -2.31
CFHR3Q02985 U6.100-201ENST00000636230 99 ntBASIC0.62□□□□□ -2.31
CFHR3Q02985 RNU6-726P-201ENST00000364680 107 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 SNORA8.2-201ENST00000384372 139 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 MIR146A-201ENST00000385201 99 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 MIR518E-201ENST00000385252 88 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.61□□□□□ -2.31
CFHR3Q02985 RNU6-75P-201ENST00000515944 104 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 CYP3A137P-201ENST00000562436 69 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
CFHR3Q02985 RNU6-49P-201ENST00000384256 107 ntBASIC0.6□□□□□ -2.31
CFHR3Q02985 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
CFHR3Q02985 Y_RNA.596-201ENST00000410462 109 ntBASIC0.6□□□□□ -2.31
CFHR3Q02985 MIR3920-201ENST00000581751 86 ntBASIC0.6□□□□□ -2.31
CFHR3Q02985 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
CFHR3Q02985 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
CFHR3Q02985 RNA5SP220-201ENST00000516298 104 ntBASIC0.59□□□□□ -2.31
CFHR3Q02985 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
CFHR3Q02985 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.59□□□□□ -2.31
CFHR3Q02985 RNU6-664P-201ENST00000362381 107 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 SNORD115-44-201ENST00000365391 82 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 SNORD101-201ENST00000384027 73 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CFHR3Q02985 SNORD41.1-201ENST00000391000 69 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 RNU6-287P-201ENST00000516230 98 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 MIR4696-201ENST00000581431 70 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
CFHR3Q02985 MIRLET7F1-201ENST00000362202 87 ntBASIC0.57□□□□□ -2.32
CFHR3Q02985 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
CFHR3Q02985 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
CFHR3Q02985 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
CFHR3Q02985 RNA5SP170-201ENST00000517150 101 ntBASIC0.57□□□□□ -2.32
CFHR3Q02985 RNU6-844P-201ENST00000517175 102 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 286.6 ms