Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 AC008834.1-201ENST00000511612 175 ntBASIC1.31□□□□□ -2.2
COL4A3Q01955 RNU6-1194P-201ENST00000516208 104 ntBASIC1.31□□□□□ -2.2
COL4A3Q01955 RNU6-65P-201ENST00000516332 98 ntBASIC1.31□□□□□ -2.2
COL4A3Q01955 SNORA25.13-201ENST00000516395 103 ntBASIC1.31□□□□□ -2.2
COL4A3Q01955 MIR4662A-201ENST00000637499 67 ntBASIC1.31□□□□□ -2.2
COL4A3Q01955 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL4A3Q01955 Y_RNA.258-201ENST00000364613 105 ntBASIC1.3□□□□□ -2.2
COL4A3Q01955 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
COL4A3Q01955 SNORD83.1-201ENST00000411362 77 ntBASIC1.3□□□□□ -2.2
COL4A3Q01955 Y_RNA.316-201ENST00000365118 111 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 SNORD63B-201ENST00000411005 70 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A3Q01955 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 MIR548H5-201ENST00000580314 60 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 MIR6082-201ENST00000613604 109 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A3Q01955 Y_RNA.56-201ENST00000362798 112 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 RNU6-624P-201ENST00000363411 107 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 Y_RNA.536-201ENST00000384621 113 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 MIR1257-201ENST00000408490 117 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 TRAJ51-201ENST00000504127 63 ntBASIC1.29□□□□□ -2.2
COL4A3Q01955 MIR330-201ENST00000362196 94 ntBASIC1.28□□□□□ -2.2
COL4A3Q01955 SNORD100-201ENST00000408573 76 ntBASIC1.28□□□□□ -2.2
COL4A3Q01955 RNU7-156P-201ENST00000517214 74 ntBASIC1.28□□□□□ -2.2
COL4A3Q01955 MIR924-201ENST00000638017 53 ntBASIC1.28□□□□□ -2.2
COL4A3Q01955 Y_RNA.13-201ENST00000362403 112 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL4A3Q01955 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
COL4A3Q01955 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A3Q01955 Y_RNA.94-201ENST00000363068 106 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 SNORA75.2-201ENST00000391138 150 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 SNORA75.3-201ENST00000391231 150 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.26□□□□□ -2.21
COL4A3Q01955 MIR4771-2-201ENST00000577758 74 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 MIR4771-1-201ENST00000582617 74 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 AC023827.1-201ENST00000569247 97 ntBASIC1.26□□□□□ -2.21
COL4A3Q01955 Y_RNA.221-201ENST00000364248 96 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 RNU6-811P-201ENST00000384069 107 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 RNU7-195P-201ENST00000458793 62 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 RNU6-75P-201ENST00000515944 104 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 SNORA18.5-201ENST00000516616 101 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 AC010487.4-201ENST00000637027 61 ntBASIC1.25□□□□□ -2.21
COL4A3Q01955 SNORD114-23-201ENST00000363536 72 ntBASIC1.24□□□□□ -2.21
COL4A3Q01955 RNU6-957P-201ENST00000363652 99 ntBASIC1.24□□□□□ -2.21
COL4A3Q01955 Y_RNA.283-201ENST00000364798 112 ntBASIC1.24□□□□□ -2.21
COL4A3Q01955 Y_RNA.697-201ENST00000516776 113 ntBASIC1.24□□□□□ -2.21
COL4A3Q01955 RNU6-765P-201ENST00000516916 99 ntBASIC1.24□□□□□ -2.21
COL4A3Q01955 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A3Q01955 RNA5SP331-201ENST00000364986 107 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 RNU6-129P-201ENST00000391022 107 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 RNU6-466P-201ENST00000391224 103 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AC015818.7-201ENST00000428754 109 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 MIR4796-201ENST00000580742 81 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 MIR8087-201ENST00000612745 78 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 MIR548U-201ENST00000390728 81 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AL450471.1-201ENST00000447509 127 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 Y_RNA.809-201ENST00000516058 95 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 RNU6-448P-201ENST00000517052 107 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AC138907.6-201ENST00000568401 126 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AC138869.1-201ENST00000568623 124 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
COL4A3Q01955 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A3Q01955 SNORA63.2-201ENST00000362603 126 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 RNU6-776P-201ENST00000364403 104 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 RNU6-1022P-201ENST00000365049 104 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 RNU6-132P-201ENST00000383863 107 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 RNA5SP292-201ENST00000390974 118 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 RNU6-977P-201ENST00000516411 103 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 SNORD92-201ENST00000585078 85 ntBASIC1.22□□□□□ -2.21
COL4A3Q01955 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
COL4A3Q01955 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A3Q01955 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COL4A3Q01955 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL4A3Q01955 MIR1-1-201ENST00000362147 71 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 MIRLET7F1-201ENST00000362202 87 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 RNU6-1260P-201ENST00000362944 107 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 RNU6-1296P-201ENST00000383879 107 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 Y_RNA.491-201ENST00000384417 107 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 RNU6-535P-201ENST00000384722 107 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 MIR519A1-201ENST00000385257 85 ntBASIC1.21□□□□□ -2.22
COL4A3Q01955 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms