Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MTND4LP30-201ENST00000454092 297 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 MTND5P5-201ENST00000503764 376 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 MTATP6P25-201ENST00000574491 261 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU6-99P-201ENST00000364721 107 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MTND1P1-201ENST00000445453 368 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 AC082651.2-201ENST00000496833 166 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR3140-201ENST00000583685 90 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR6509-201ENST00000614603 85 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR6128-201ENST00000615528 109 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-832P-201ENST00000363319 107 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-297P-201ENST00000384636 107 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR628-201ENST00000385229 95 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 PMCHL1-202ENST00000423102 261 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-563P-201ENST00000364872 108 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNY3P10-201ENST00000384764 102 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR34C-201ENST00000384831 77 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU4-43P-201ENST00000410628 137 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 U8.20-201ENST00000459445 131 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR514A2-201ENST00000385131 88 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 MIR514A3-201ENST00000385132 88 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-373P-201ENST00000411247 98 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-518P-201ENST00000516056 96 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNU6-273P-201ENST00000516937 96 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.96□□□□□ -2.56
HSPG2P98160 RNY3P3-201ENST00000363816 102 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 RNU6-458P-201ENST00000384179 107 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 MIR548A1-201ENST00000385041 97 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 MT-TT-201ENST00000387460 66 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 AL118496.2-201ENST00000448300 230 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 RNU6-307P-201ENST00000516743 106 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 VN1R91P-201ENST00000594377 169 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 U6.58-201ENST00000613107 107 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 MIR6863-201ENST00000636112 90 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 AC068137.3-201ENST00000639191 341 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HSPG2P98160 RNU7-88P-201ENST00000458752 63 ntBASIC-0.97□□□□□ -2.56
HSPG2P98160 RNU6-129P-201ENST00000391022 107 ntBASIC-0.97□□□□□ -2.57
HSPG2P98160 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.97□□□□□ -2.57
HSPG2P98160 AL512360.1-201ENST00000555346 234 ntBASIC-0.97□□□□□ -2.57
HSPG2P98160 AL512310.12-203ENST00000640543 90 ntBASIC-0.97□□□□□ -2.57
HSPG2P98160 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 SNORA19.1-201ENST00000410656 129 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.98□□□□□ -2.57
HSPG2P98160 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-382P-201ENST00000365181 106 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 MIR4773-1-201ENST00000637203 78 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNY4P10-201ENST00000365571 96 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-608P-201ENST00000383927 104 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 SEPT14P3-201ENST00000439401 183 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 AL732372.2-207ENST00000445840 183 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 SEPT14P2-201ENST00000453405 183 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 FGF7P7-201ENST00000514120 227 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-65P-201ENST00000516332 98 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-566P-201ENST00000516790 107 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 FO082796.1-201ENST00000523795 183 ntBASIC-0.98□□□□□ -2.57
HSPG2P98160 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 SNORA7.5-201ENST00000410672 110 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 SNORD4B-201ENST00000459083 72 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR548AG1-201ENST00000579932 66 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 AL132765.2-201ENST00000610812 351 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR548Q-201ENST00000408404 100 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR548F5-201ENST00000408421 86 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR548I1-201ENST00000408810 149 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU6-62P-201ENST00000516526 102 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 AL138825.1-201ENST00000618587 192 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU5F-1-201ENST00000362507 117 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 SNORD113-6-201ENST00000363345 75 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 SNORD38.1-201ENST00000363863 68 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR520D-201ENST00000385002 87 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR509-1-201ENST00000385265 94 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 MIR509-2-201ENST00000390724 91 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU6-141P-201ENST00000410499 105 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNA5SP236-201ENST00000516169 116 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 U6.106-201ENST00000636360 105 ntBASIC-0.99□□□□□ -2.57
HSPG2P98160 RNU6-478P-201ENST00000363904 110 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-681P-201ENST00000364012 104 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms