Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL161932.1-201ENST00000437408 146 ntBASIC-0.94□□□□□ -2.56
CBX1P83916 AC021753.1-201ENST00000635724 168 ntBASIC-0.94□□□□□ -2.56
CBX1P83916 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 MIR9-2-201ENST00000384838 87 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 AC244090.1-201ENST00000441884 93 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 SPINT5P-201ENST00000448174 155 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.95□□□□□ -2.56
CBX1P83916 SNORA20.1-201ENST00000364790 130 ntBASIC-0.96□□□□□ -2.56
CBX1P83916 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 MT-TI-201ENST00000387365 69 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 MIR759-201ENST00000390224 91 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 RNU6-735P-201ENST00000410612 107 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 Z95118.1-201ENST00000421372 247 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 MTCYBP9-201ENST00000431021 303 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 AP000676.1-201ENST00000533307 52 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 AC062037.2-201ENST00000610137 73 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 AL391099.1-201ENST00000624635 187 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 MIR1255B1-201ENST00000636325 63 ntBASIC-0.97□□□□□ -2.56
CBX1P83916 SNORA63-201ENST00000363450 132 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 RNU6-900P-201ENST00000384498 102 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 RNU6-738P-201ENST00000384531 106 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 MIR652-201ENST00000385278 98 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 RNU4-63P-201ENST00000411313 118 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 AC022559.1-201ENST00000520905 205 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 AL512310.12-203ENST00000640543 90 ntBASIC-0.98□□□□□ -2.57
CBX1P83916 SNORD114-14-201ENST00000362723 75 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 RNU6-957P-201ENST00000363652 99 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 RNU6-901P-201ENST00000384593 106 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 MIR216B-201ENST00000390186 82 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 SNORA7.5-201ENST00000410672 110 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 AL445193.1-201ENST00000441183 141 ntBASIC-0.99□□□□□ -2.57
CBX1P83916 Y_RNA.173-201ENST00000363776 113 ntBASIC-1□□□□□ -2.57
CBX1P83916 Y_RNA.433-201ENST00000384089 102 ntBASIC-1□□□□□ -2.57
CBX1P83916 MIR548G-201ENST00000408442 89 ntBASIC-1□□□□□ -2.57
CBX1P83916 RNU6-1057P-201ENST00000517162 102 ntBASIC-1□□□□□ -2.57
CBX1P83916 AC096720.1-201ENST00000604441 183 ntBASIC-1□□□□□ -2.57
CBX1P83916 RNU6-90P-201ENST00000606352 106 ntBASIC-1□□□□□ -2.57
CBX1P83916 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.01□□□□□ -2.57
CBX1P83916 SNORA3B-201ENST00000391305 131 ntBASIC-1.01□□□□□ -2.57
CBX1P83916 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.01□□□□□ -2.57
CBX1P83916 IGKV1-22-201ENST00000524313 326 ntBASIC-1.01□□□□□ -2.57
CBX1P83916 AC130289.1-201ENST00000577321 73 ntBASIC-1.01□□□□□ -2.57
CBX1P83916 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 SNORD38.1-201ENST00000363863 68 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 SNORD95.1-201ENST00000364099 68 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 MIR204-201ENST00000385200 110 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 MIR3121-201ENST00000579680 77 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 AC072026.1-201ENST00000605023 201 ntBASIC-1.02□□□□□ -2.57
CBX1P83916 SNORD101-201ENST00000384027 73 ntBASIC-1.03□□□□□ -2.57
CBX1P83916 RNU6-466P-201ENST00000391224 103 ntBASIC-1.03□□□□□ -2.57
CBX1P83916 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.04□□□□□ -2.58
CBX1P83916 MIR568-201ENST00000385036 95 ntBASIC-1.04□□□□□ -2.58
CBX1P83916 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.04□□□□□ -2.58
CBX1P83916 RNA5SP395-201ENST00000516567 118 ntBASIC-1.04□□□□□ -2.58
CBX1P83916 MIR6086-201ENST00000638065 55 ntBASIC-1.04□□□□□ -2.58
CBX1P83916 SNORD56B-201ENST00000384713 71 ntBASIC-1.05□□□□□ -2.58
CBX1P83916 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.05□□□□□ -2.58
CBX1P83916 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.05□□□□□ -2.58
CBX1P83916 RNA5SP169-201ENST00000517268 117 ntBASIC-1.05□□□□□ -2.58
CBX1P83916 MIR548O2-201ENST00000616090 70 ntBASIC-1.05□□□□□ -2.58
CBX1P83916 SNORD115-25-201ENST00000362619 82 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 RNY4P3-201ENST00000365254 95 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 RNU4-11P-201ENST00000365287 132 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 RNA5SP136-201ENST00000410906 107 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 MIR4696-201ENST00000581431 70 ntBASIC-1.06□□□□□ -2.58
CBX1P83916 RNU6-664P-201ENST00000362381 107 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 RNU6-363P-201ENST00000362895 105 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 RNU6-915P-201ENST00000364943 103 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 RNU6-30P-201ENST00000384561 107 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 MIR548D2-201ENST00000384955 97 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 AC021146.6-201ENST00000514659 117 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 RNU6-138P-201ENST00000515952 107 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 RN7SKP19-201ENST00000516016 252 ntBASIC-1.07□□□□□ -2.58
CBX1P83916 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 SNORD2-201ENST00000459163 69 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 MIR4280-201ENST00000582178 76 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 U4.1-201ENST00000620349 87 ntBASIC-1.08□□□□□ -2.58
CBX1P83916 RNU6-647P-201ENST00000364243 107 ntBASIC-1.09□□□□□ -2.58
CBX1P83916 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms