Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC068339.1-201ENST00000526965 141 ntBASIC0.15□□□□□ -2.39
CX3CL1P78423 AC073869.9-201ENST00000641610 120 ntBASIC0.15□□□□□ -2.39
CX3CL1P78423 SNORD36A-201ENST00000362874 73 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 U8.6-201ENST00000364939 135 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 RNU6-81P-201ENST00000365608 104 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 RNU6-243P-201ENST00000391140 107 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.14□□□□□ -2.39
CX3CL1P78423 AC096720.1-201ENST00000604441 183 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
CX3CL1P78423 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.14□□□□□ -2.39
CX3CL1P78423 RNU6-832P-201ENST00000363319 107 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 Y_RNA.261-201ENST00000364631 102 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 Y_RNA.563-201ENST00000384707 108 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 RNU6-127P-201ENST00000390897 107 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
CX3CL1P78423 RNY3P2-201ENST00000362918 102 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 AC008267.6-201ENST00000441664 139 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 MIR5009-201ENST00000578736 100 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 MIR5706-201ENST00000579841 80 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 TRDV1-202ENST00000621643 102 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
CX3CL1P78423 RNU6-1163P-201ENST00000364516 107 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 Y_RNA.281-201ENST00000364774 94 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 RNU6-880P-201ENST00000384526 107 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 MIR501-201ENST00000390204 84 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 AL161932.1-201ENST00000437408 146 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 RNA5SP484-201ENST00000458857 111 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 RNU7-74P-201ENST00000459104 62 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 MIR548AG2-201ENST00000581228 64 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 uc_338.28-201ENST00000612082 187 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 MIR499B-201ENST00000636498 73 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 AC010487.4-201ENST00000637027 61 ntBASIC0.11□□□□□ -2.39
CX3CL1P78423 RNU6-509P-201ENST00000363519 107 ntBASIC0.1□□□□□ -2.39
CX3CL1P78423 SNORD115-44-201ENST00000365391 82 ntBASIC0.1□□□□□ -2.39
CX3CL1P78423 Y_RNA.659-201ENST00000515994 113 ntBASIC0.1□□□□□ -2.39
CX3CL1P78423 AL365222.1-201ENST00000614661 98 ntBASIC0.1□□□□□ -2.39
CX3CL1P78423 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
CX3CL1P78423 Y_RNA.78-201ENST00000362970 110 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 Y_RNA.118-201ENST00000363300 101 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 RNU6-1244P-201ENST00000363614 108 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 SNORD116-21-201ENST00000384507 92 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 MIR489-201ENST00000384923 84 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 NAMPTP3-201ENST00000569273 224 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 MIR3613-201ENST00000579844 87 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 RN7SL793P-201ENST00000583259 296 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 U7.6-201ENST00000610841 64 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 U6.100-201ENST00000636230 99 ntBASIC0.09□□□□□ -2.4
CX3CL1P78423 RNU6-1125P-201ENST00000363601 107 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 RNU6-957P-201ENST00000363652 99 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 Y_RNA.163-201ENST00000363702 113 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 RNU6-480P-201ENST00000384332 107 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 MIR181B2-201ENST00000385004 89 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 AC006210.1-201ENST00000424882 111 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 AC141557.1-201ENST00000540982 400 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
CX3CL1P78423 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.08□□□□□ -2.4
CX3CL1P78423 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 RNY1P4-201ENST00000384595 115 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 MIR617-201ENST00000385030 97 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 MIR519E-201ENST00000385075 84 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 SNORD110-201ENST00000408189 75 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 AC109327.2-201ENST00000448339 378 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 MIR2113-201ENST00000459007 91 ntBASIC0.07□□□□□ -2.4
CX3CL1P78423 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
CX3CL1P78423 RNU6-466P-201ENST00000391224 103 ntBASIC0.06□□□□□ -2.4
CX3CL1P78423 Y_RNA.596-201ENST00000410462 109 ntBASIC0.06□□□□□ -2.4
CX3CL1P78423 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.06□□□□□ -2.4
CX3CL1P78423 MIR548AD-201ENST00000584780 82 ntBASIC0.06□□□□□ -2.4
CX3CL1P78423 SNORD45B-201ENST00000364617 72 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU1-141P-201ENST00000364623 158 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-1107P-201ENST00000364817 104 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-1014P-201ENST00000383940 103 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 SNORA51.5-201ENST00000384126 131 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 snoU13.11-201ENST00000459219 104 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-287P-201ENST00000516230 98 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-412P-201ENST00000516434 106 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-782P-201ENST00000516852 104 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 MIR3910-1-201ENST00000580936 111 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-86P-201ENST00000606534 107 ntBASIC0.05□□□□□ -2.4
CX3CL1P78423 RNU6-1144P-201ENST00000384247 104 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 RNU6-476P-201ENST00000384726 107 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 HMGN2P22-201ENST00000427588 175 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 MIR4439-201ENST00000583746 80 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 MIR4677-201ENST00000584153 80 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 AC025521.1-201ENST00000621624 286 ntBASIC0.04□□□□□ -2.4
CX3CL1P78423 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 RNA5SP325-201ENST00000363756 130 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 Y_RNA.283-201ENST00000364798 112 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 RNU6-1117P-201ENST00000384525 104 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 AL603908.1-201ENST00000406098 201 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 MIR548H2-201ENST00000408874 88 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 AC093423.1-201ENST00000440817 142 ntBASIC0.03□□□□□ -2.4
CX3CL1P78423 Y_RNA.648-201ENST00000459455 110 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms