Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RNU6-977P-201ENST00000516411 103 ntBASIC1.46□□□□□ -2.18
CHMP4BP1P59074 MIR4666B-201ENST00000578142 81 ntBASIC1.46□□□□□ -2.18
CHMP4BP1P59074 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
CHMP4BP1P59074 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHMP4BP1P59074 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CHMP4BP1P59074 MIR489-201ENST00000384923 84 ntBASIC1.45□□□□□ -2.18
CHMP4BP1P59074 MIR519C-201ENST00000385053 87 ntBASIC1.45□□□□□ -2.18
CHMP4BP1P59074 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.18
CHMP4BP1P59074 MIR548H5-201ENST00000580314 60 ntBASIC1.45□□□□□ -2.18
CHMP4BP1P59074 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHMP4BP1P59074 Y_RNA.32-201ENST00000362589 110 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 RNU6-1335P-201ENST00000365426 107 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 RNU6-242P-201ENST00000384359 107 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 RNU6-535P-201ENST00000384722 107 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 MIR520F-201ENST00000384824 87 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 SNORD90-201ENST00000391145 111 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 Y_RNA.809-201ENST00000516058 95 ntBASIC1.44□□□□□ -2.18
CHMP4BP1P59074 MIRLET7F1-201ENST00000362202 87 ntBASIC1.43□□□□□ -2.18
CHMP4BP1P59074 Y_RNA.437-201ENST00000384113 113 ntBASIC1.43□□□□□ -2.18
CHMP4BP1P59074 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
CHMP4BP1P59074 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHMP4BP1P59074 MIR1-1-201ENST00000362147 71 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 RNU6-1260P-201ENST00000362944 107 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 MIR200A-201ENST00000384875 90 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 AC140658.3-201ENST00000567603 271 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 uc_338.16-201ENST00000621804 95 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 U6.100-201ENST00000636230 99 ntBASIC1.42□□□□□ -2.18
CHMP4BP1P59074 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.42□□□□□ -2.18
CHMP4BP1P59074 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CHMP4BP1P59074 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CHMP4BP1P59074 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHMP4BP1P59074 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CHMP4BP1P59074 Y_RNA.316-201ENST00000365118 111 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 Y_RNA.426-201ENST00000384068 113 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 SNORA31.14-201ENST00000516728 116 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 MIR3064-201ENST00000581130 66 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 TRDV1-202ENST00000621643 102 ntBASIC1.41□□□□□ -2.18
CHMP4BP1P59074 MIR520H-201ENST00000385126 88 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 SNORD89-201ENST00000390981 114 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 RNU1-119P-201ENST00000391122 165 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 Y_RNA.685-201ENST00000516532 108 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 MIR4536-1-201ENST00000583537 88 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
CHMP4BP1P59074 MIR3202-2-201ENST00000635980 79 ntBASIC1.4□□□□□ -2.19
CHMP4BP1P59074 SNORD114-24-201ENST00000365029 72 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 RNU6-652P-201ENST00000365488 107 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 MIR599-201ENST00000385069 95 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 Y_RNA.607-201ENST00000410597 98 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.39□□□□□ -2.19
CHMP4BP1P59074 FABP5P4-201ENST00000437203 171 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 AC097635.1-201ENST00000450678 155 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 AC093729.1-201ENST00000513074 128 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 RNA5SP220-201ENST00000516298 104 ntBASIC1.39□□□□□ -2.19
CHMP4BP1P59074 RNU6-466P-201ENST00000391224 103 ntBASIC1.38□□□□□ -2.19
CHMP4BP1P59074 RNU6-65P-201ENST00000516332 98 ntBASIC1.38□□□□□ -2.19
CHMP4BP1P59074 SNORA25.13-201ENST00000516395 103 ntBASIC1.38□□□□□ -2.19
CHMP4BP1P59074 SNORA18.5-201ENST00000516616 101 ntBASIC1.38□□□□□ -2.19
CHMP4BP1P59074 AC104996.3-201ENST00000590718 94 ntBASIC1.38□□□□□ -2.19
CHMP4BP1P59074 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4BP1P59074 RNU6-811P-201ENST00000384069 107 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 MIR1236-201ENST00000408340 102 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 AC244505.6-201ENST00000452829 130 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 AC067940.1-201ENST00000458411 300 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 RNU6-1265P-201ENST00000516342 103 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 AC138907.6-201ENST00000568401 126 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 AC138869.1-201ENST00000568623 124 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 RNU7-10P-201ENST00000607194 63 ntBASIC1.37□□□□□ -2.19
CHMP4BP1P59074 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.36□□□□□ -2.19
CHMP4BP1P59074 Y_RNA.94-201ENST00000363068 106 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 RNU6-478P-201ENST00000363904 110 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 Y_RNA.221-201ENST00000364248 96 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 MIR942-201ENST00000401111 86 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 RPS29P1-201ENST00000465274 159 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 MIR4796-201ENST00000580742 81 ntBASIC1.36□□□□□ -2.19
CHMP4BP1P59074 U7.7-201ENST00000459276 60 ntBASIC1.35□□□□□ -2.19
CHMP4BP1P59074 MTRNR2L2-201ENST00000604882 87 ntBASIC1.35□□□□□ -2.19
CHMP4BP1P59074 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP4BP1P59074 MIR520E-201ENST00000384867 87 ntBASIC1.34□□□□□ -2.19
CHMP4BP1P59074 AL450471.1-201ENST00000447509 127 ntBASIC1.34□□□□□ -2.19
CHMP4BP1P59074 MIR4696-201ENST00000581431 70 ntBASIC1.34□□□□□ -2.19
CHMP4BP1P59074 MIR4295-201ENST00000585286 85 ntBASIC1.34□□□□□ -2.19
CHMP4BP1P59074 MIR644A-201ENST00000385262 94 ntBASIC1.33□□□□□ -2.2
CHMP4BP1P59074 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CHMP4BP1P59074 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
CHMP4BP1P59074 AC002350.1-201ENST00000490759 375 ntBASIC1.33□□□□□ -2.2
CHMP4BP1P59074 RNU6-1110P-201ENST00000516462 101 ntBASIC1.33□□□□□ -2.2
CHMP4BP1P59074 RNU6-638P-201ENST00000516582 104 ntBASIC1.33□□□□□ -2.2
CHMP4BP1P59074 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.33□□□□□ -2.2
CHMP4BP1P59074 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CHMP4BP1P59074 RNU6-624P-201ENST00000363411 107 ntBASIC1.32□□□□□ -2.2
CHMP4BP1P59074 Y_RNA.491-201ENST00000384417 107 ntBASIC1.32□□□□□ -2.2
CHMP4BP1P59074 SNORD105-201ENST00000386910 85 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 351.2 ms