Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MIR548G-201ENST00000408442 89 ntBASIC-0.07□□□□□ -2.42
CDH13P55290 RNU6-257P-201ENST00000410238 98 ntBASIC-0.07□□□□□ -2.42
CDH13P55290 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
CDH13P55290 SPINT5P-201ENST00000448174 155 ntBASIC-0.07□□□□□ -2.42
CDH13P55290 MIR5190-201ENST00000581537 80 ntBASIC-0.07□□□□□ -2.42
CDH13P55290 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CDH13P55290 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 MIR1912-201ENST00000410389 80 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 AL353813.1-201ENST00000440700 253 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 MIR4677-201ENST00000584153 80 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 AL109933.3-201ENST00000619095 188 ntBASIC-0.08□□□□□ -2.42
CDH13P55290 MIR617-201ENST00000385030 97 ntBASIC-0.09□□□□□ -2.42
CDH13P55290 RNU6-243P-201ENST00000391140 107 ntBASIC-0.09□□□□□ -2.42
CDH13P55290 AL162726.3-218ENST00000636401 95 ntBASIC-0.09□□□□□ -2.42
CDH13P55290 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 RNU6-816P-201ENST00000390914 107 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 RNA5SP484-201ENST00000458857 111 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.1□□□□□ -2.43
CDH13P55290 RNU6-772P-201ENST00000516042 105 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 NAMPTP3-201ENST00000569273 224 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 MIR4679-2-201ENST00000578358 77 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 AL442128.1-201ENST00000615151 90 ntBASIC-0.1□□□□□ -2.43
CDH13P55290 SNORD36A-201ENST00000362874 73 ntBASIC-0.11□□□□□ -2.43
CDH13P55290 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.11□□□□□ -2.43
CDH13P55290 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.11□□□□□ -2.43
CDH13P55290 AL157777.2-201ENST00000258070 137 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 RNU1-141P-201ENST00000364623 158 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 SNORA75.1-201ENST00000391130 148 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 HMGN2P22-201ENST00000427588 175 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 MIR2909-201ENST00000617113 69 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
CDH13P55290 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 RNU6-346P-201ENST00000516288 111 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 MIR3925-201ENST00000584674 77 ntBASIC-0.13□□□□□ -2.43
CDH13P55290 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 RNU7-165P-201ENST00000458864 60 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 SNORA25.13-201ENST00000516395 103 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 MIR548AG2-201ENST00000581228 64 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 MIR3668-201ENST00000582138 75 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 AC096720.1-201ENST00000604441 183 ntBASIC-0.14□□□□□ -2.43
CDH13P55290 RNU6-80P-201ENST00000384195 107 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 MIR519E-201ENST00000385075 84 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 MIR548I1-201ENST00000408810 149 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 AC093423.1-201ENST00000440817 142 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.15□□□□□ -2.43
CDH13P55290 AC069503.3-201ENST00000618674 145 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 TRDV1-202ENST00000621643 102 ntBASIC-0.15□□□□□ -2.43
CDH13P55290 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.16□□□□□ -2.44
CDH13P55290 MIR2113-201ENST00000459007 91 ntBASIC-0.16□□□□□ -2.44
CDH13P55290 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.16□□□□□ -2.44
CDH13P55290 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.16□□□□□ -2.44
CDH13P55290 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.16□□□□□ -2.44
CDH13P55290 RNA5SP257-201ENST00000363023 116 ntBASIC-0.17□□□□□ -2.44
CDH13P55290 MIR876-201ENST00000401147 81 ntBASIC-0.17□□□□□ -2.44
CDH13P55290 RNU6-180P-201ENST00000516697 61 ntBASIC-0.17□□□□□ -2.44
CDH13P55290 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
CDH13P55290 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 SNORD50.2-201ENST00000365465 70 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-209P-201ENST00000384118 107 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-480P-201ENST00000384332 107 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-907P-201ENST00000390924 102 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-287P-201ENST00000516230 98 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-971P-201ENST00000516920 106 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 AC007012.1-201ENST00000567192 175 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 MIR4694-201ENST00000578534 80 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 AC084368.1-201ENST00000620935 65 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 MIR3914-2-201ENST00000637339 95 ntBASIC-0.18□□□□□ -2.44
CDH13P55290 RNU6-302P-201ENST00000365249 107 ntBASIC-0.19□□□□□ -2.44
CDH13P55290 RNA5SP163-201ENST00000410304 99 ntBASIC-0.19□□□□□ -2.44
CDH13P55290 RNU7-107P-201ENST00000459121 61 ntBASIC-0.19□□□□□ -2.44
CDH13P55290 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
CDH13P55290 RNU6-756P-201ENST00000383997 107 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 RNU6V-201ENST00000384105 107 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 MIR577-201ENST00000385196 96 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 CR383656.4-201ENST00000546909 122 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 U6.95-201ENST00000636931 70 ntBASIC-0.2□□□□□ -2.44
CDH13P55290 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.21□□□□□ -2.44
CDH13P55290 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
CDH13P55290 RNU6-466P-201ENST00000391224 103 ntBASIC-0.21□□□□□ -2.44
CDH13P55290 AL035470.1-201ENST00000622571 220 ntBASIC-0.21□□□□□ -2.44
CDH13P55290 U6.100-201ENST00000636230 99 ntBASIC-0.21□□□□□ -2.44
CDH13P55290 MIR148A-201ENST00000362215 68 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms