RNAct
Search
Pairwise
Browse
Proteins
RNAs
Download
About
Search
Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
SNORD126-201
ENST00000459475
77 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
RNU6-175P-201
ENST00000516896
107 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
MIR4460-201
ENST00000577862
86 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
TRDV1-202
ENST00000621643
102 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
Y_RNA.170-201
ENST00000363746
110 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
Y_RNA.198-201
ENST00000364013
98 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
RNU6-915P-201
ENST00000364943
103 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
Y_RNA.401-201
ENST00000383965
117 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
RN7SKP19-201
ENST00000516016
252 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
Y_RNA.692-201
ENST00000516627
105 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
RNU5B-6P-201
ENST00000516765
68 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
MIR4788-201
ENST00000639104
80 nt
BASIC
-0.46
□□□□□ -2.48
CDH4
P55283
SYCP2-202
ENST00000371001
5479 nt
APPRIS P2
TSL 1 (best)
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
Y_RNA.114-201
ENST00000363265
113 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
Y_RNA.391-201
ENST00000383933
94 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
RNU6-35P-201
ENST00000384530
107 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
MT-TY-201
ENST00000387409
66 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
AL353813.1-201
ENST00000440700
253 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
Y_RNA.696-201
ENST00000516725
107 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
AL590491.3-201
ENST00000610731
82 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
U6.100-201
ENST00000636230
99 nt
BASIC
-0.47
□□□□□ -2.48
CDH4
P55283
RNU6-1313P-201
ENST00000362622
102 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
RNU6-151P-201
ENST00000364158
107 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
Y_RNA.247-201
ENST00000364500
92 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
MIR539-201
ENST00000365690
78 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
RNU6-463P-201
ENST00000384340
107 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
Y_RNA.489-201
ENST00000384410
101 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
RNU6-243P-201
ENST00000391140
107 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
SNORA7.5-201
ENST00000410672
110 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
Y_RNA.662-201
ENST00000516028
97 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
RNU4ATAC4P-201
ENST00000516307
126 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
MIR4263-201
ENST00000584745
83 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
MTRNR2L2-201
ENST00000604882
87 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
Y_RNA.778-201
ENST00000620203
90 nt
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
CCDC7-215
ENST00000639629
4158 nt
APPRIS ALT2
TSL 5
BASIC
-0.48
□□□□□ -2.49
CDH4
P55283
Y_RNA.57-201
ENST00000362806
113 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
Y_RNA.207-201
ENST00000364142
106 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
Y_RNA.213-201
ENST00000364178
111 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
Y_RNA.215-201
ENST00000364204
112 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
SNORD114-29-201
ENST00000364819
70 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
MIR196A2-201
ENST00000385189
110 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
Y_RNA.596-201
ENST00000410462
109 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
RNU6-1234P-201
ENST00000516877
103 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
MIR4493-201
ENST00000584016
73 nt
BASIC
-0.49
□□□□□ -2.49
CDH4
P55283
MIR101-1-201
ENST00000362265
75 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNU6-363P-201
ENST00000362895
105 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNA5SP98-201
ENST00000363158
137 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
SNORD114-11-201
ENST00000363738
75 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
Y_RNA.173-201
ENST00000363776
113 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNU6-200P-201
ENST00000364743
107 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
Y_RNA.294-201
ENST00000364916
102 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNU6-1130P-201
ENST00000365434
107 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
Y_RNA.407-201
ENST00000383986
113 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNU6-154P-201
ENST00000384306
106 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
MIR548D2-201
ENST00000384955
97 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNA5SP136-201
ENST00000410906
107 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
SPINT5P-201
ENST00000448174
155 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
AC074198.2-201
ENST00000508153
258 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
MIR8064-201
ENST00000612863
90 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
AP001340.1-201
ENST00000624405
217 nt
BASIC
-0.5
□□□□□ -2.49
CDH4
P55283
RNU6-957P-201
ENST00000363652
99 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
SNORD38.1-201
ENST00000363863
68 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNU6-647P-201
ENST00000364243
107 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNU6-1144P-201
ENST00000384247
104 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
Y_RNA.580-201
ENST00000391004
95 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
MIR1263-201
ENST00000408324
86 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
MIR548G-201
ENST00000408442
89 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNU6-138P-201
ENST00000515952
107 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNA5SP395-201
ENST00000516567
118 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
AC007012.1-201
ENST00000567192
175 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNU6-90P-201
ENST00000606352
106 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
Evf-2_5p.1-201
ENST00000614213
142 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
AL512310.12-203
ENST00000640543
90 nt
BASIC
-0.51
□□□□□ -2.49
CDH4
P55283
RNU6-379P-201
ENST00000363813
104 nt
BASIC
-0.52
□□□□□ -2.49
CDH4
P55283
MIR759-201
ENST00000390224
91 nt
BASIC
-0.52
□□□□□ -2.49
CDH4
P55283
Y_RNA.144-201
ENST00000363521
113 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
Y_RNA.344-201
ENST00000365381
112 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
SNORA32.3-201
ENST00000384772
121 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
RNU6-394P-201
ENST00000410735
107 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
RNU6-284P-201
ENST00000411105
106 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
RNU6-1018P-201
ENST00000516577
106 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
AP001328.1-201
ENST00000528550
176 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
FTX_2.1-201
ENST00000618816
94 nt
BASIC
-0.53
□□□□□ -2.49
CDH4
P55283
Y_RNA.78-201
ENST00000362970
110 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
MIR513C-201
ENST00000401352
84 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
RNU6ATAC23P-201
ENST00000408448
123 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
AL158147.1-201
ENST00000443970
75 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
COX7A2-206
ENST00000472311
325 nt
TSL 2
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
RNU6-781P-201
ENST00000516377
101 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
MIR4432-201
ENST00000581823
84 nt
BASIC
-0.54
□□□□□ -2.5
CDH4
P55283
Y_RNA.29-201
ENST00000362570
113 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
RNU6-235P-201
ENST00000362644
107 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
RNU6-1036P-201
ENST00000383959
104 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
RNU6-480P-201
ENST00000384332
107 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
Y_RNA.528-201
ENST00000384575
108 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
MIR652-201
ENST00000385278
98 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
TRAJ28-201
ENST00000390509
66 nt
APPRIS P1
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
AC114755.3-201
ENST00000481111
251 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
MIR4696-201
ENST00000581431
70 nt
BASIC
-0.55
□□□□□ -2.5
CDH4
P55283
AC004792.1-201
ENST00000614523
137 nt
BASIC
-0.55
□□□□□ -2.5
First
Previous
975
Next
Last
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms