Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 RNU6-175P-201ENST00000516896 107 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 MIR4460-201ENST00000577862 86 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 TRDV1-202ENST00000621643 102 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 RNU6-915P-201ENST00000364943 103 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 RN7SKP19-201ENST00000516016 252 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
CDH4P55283 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
CDH4P55283 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 RNU6-35P-201ENST00000384530 107 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 AL353813.1-201ENST00000440700 253 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 U6.100-201ENST00000636230 99 ntBASIC-0.47□□□□□ -2.48
CDH4P55283 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 RNU6-151P-201ENST00000364158 107 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 MIR539-201ENST00000365690 78 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 RNU6-463P-201ENST00000384340 107 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 RNU6-243P-201ENST00000391140 107 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 SNORA7.5-201ENST00000410672 110 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 MIR4263-201ENST00000584745 83 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.48□□□□□ -2.49
CDH4P55283 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.48□□□□□ -2.49
CDH4P55283 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 SNORD114-29-201ENST00000364819 70 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 MIR196A2-201ENST00000385189 110 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 MIR4493-201ENST00000584016 73 ntBASIC-0.49□□□□□ -2.49
CDH4P55283 MIR101-1-201ENST00000362265 75 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNU6-363P-201ENST00000362895 105 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNA5SP98-201ENST00000363158 137 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNU6-200P-201ENST00000364743 107 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNU6-154P-201ENST00000384306 106 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 MIR548D2-201ENST00000384955 97 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNA5SP136-201ENST00000410906 107 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 SPINT5P-201ENST00000448174 155 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 AC074198.2-201ENST00000508153 258 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 MIR8064-201ENST00000612863 90 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 AP001340.1-201ENST00000624405 217 ntBASIC-0.5□□□□□ -2.49
CDH4P55283 RNU6-957P-201ENST00000363652 99 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 SNORD38.1-201ENST00000363863 68 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNU6-647P-201ENST00000364243 107 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 MIR1263-201ENST00000408324 86 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 MIR548G-201ENST00000408442 89 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNU6-138P-201ENST00000515952 107 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNA5SP395-201ENST00000516567 118 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 AC007012.1-201ENST00000567192 175 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNU6-90P-201ENST00000606352 106 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 AL512310.12-203ENST00000640543 90 ntBASIC-0.51□□□□□ -2.49
CDH4P55283 RNU6-379P-201ENST00000363813 104 ntBASIC-0.52□□□□□ -2.49
CDH4P55283 MIR759-201ENST00000390224 91 ntBASIC-0.52□□□□□ -2.49
CDH4P55283 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 RNU6-394P-201ENST00000410735 107 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 AP001328.1-201ENST00000528550 176 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 FTX_2.1-201ENST00000618816 94 ntBASIC-0.53□□□□□ -2.49
CDH4P55283 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 MIR513C-201ENST00000401352 84 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 AL158147.1-201ENST00000443970 75 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.54□□□□□ -2.5
CDH4P55283 RNU6-781P-201ENST00000516377 101 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 MIR4432-201ENST00000581823 84 ntBASIC-0.54□□□□□ -2.5
CDH4P55283 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 RNU6-235P-201ENST00000362644 107 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 RNU6-480P-201ENST00000384332 107 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 MIR652-201ENST00000385278 98 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
CDH4P55283 AC114755.3-201ENST00000481111 251 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 MIR4696-201ENST00000581431 70 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 AC004792.1-201ENST00000614523 137 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms